Query= MSMg01no434_k17.b1 MSMg01no434_k17.b1 CHROMAT_FILE:
MSMg01no434_k17.b1 PHD_FILE: MSMg01no434_k17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:09 2005
(326 letters)
>mm_chr13_98943395_98944120
Length = 726
Score = 538 bits (278), Expect = e-157
Identities = 314/326 (96%), Gaps = 2/326 (0%)
Strand = Plus / Plus
Query: 2 gtttcaccaagtggcctcactgtggatacctgagacaagagtccacacatttcaaggtca 61
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 202 gtttcaccaagtggcctcactatgaatacctgagacaagagtccacacatttcaaggtca 261
Query: 62 gggagtctgaacgtctcatctactaatgatgcgtgaaaacctctggatttccgtttctat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gggagtctgaacgtctcatctactaatgatgcgtgaaaacctctggatttccgtttctat 321
Query: 122 gtggactgcccactgccactaacctttccctggtctccccactgttagccccagttcact 181
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 322 gtggattgcccactgccactaacctctccctggtctccccactgttagccccagttcact 381
Query: 182 ctgtagccccgtggctaagattcatatcctgaaaatactgtcattgactaccatctagcc 241
|||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 382 ctgtagccccatggctaagcttcatatcctgaaaatactgtcgttgactaccatctagcc 441
Query: 242 tggtcctcntt-tattgtcttcagtggcttccaacaacctagagagcaaaggcctcccac 300
|||||| | || || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tggtcccc-ttctaaagtcttcagtggcttccaacaacctagagagcaaaggcctcccac 500
Query: 301 tgtgtgtgtgtgtgtgtgtgtgtgtg 326
||||||||||||||||||||||||||
Sbjct: 501 tgtgtgtgtgtgtgtgtgtgtgtgtg 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no434_k17.g1 MSMg01no434_k17.g1 CHROMAT_FILE:
MSMg01no434_k17.g1 PHD_FILE: MSMg01no434_k17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:09 2005
(234 letters)
>mm_chr13_99129193_99129826
Length = 634
Score = 410 bits (212), Expect = e-119
Identities = 229/238 (96%), Gaps = 6/238 (2%)
Strand = Plus / Minus
Query: 1 atccgcagatccatccgcaaagtttgggcccaagaagactgctgggcagggggacagaac 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 349 atccgcagatccatccgcaaagtttgggcacaagaagactgctgggcagggggacagaac 290
Query: 61 agcttaggtgggtgcacacaaagatgcttcagcaagtgaaagatggggaaagcgccccac 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 289 agcttaggtgggtgcacacaaagatgctgcagcaagtgaaagatggggaaagcgccccac 230
Query: 121 cgctttcccttcacttcctcagttacgtgtttctttcttt------ttttcttttttctt 174
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 229 cgctttcccttcacttcctcagttacgtgtttctttctttctttttttttcttttttctt 170
Query: 175 tttctttaataggaacggaagtgcctcttaaatgtgtggggtgggaatggagaggaaa 232
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tttctttaataggaaaggaagtgcctcttaaatgtgtggggtgggaatggagaggaaa 112
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
