CTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATTTCCTTCGCCCCTGGGTCAATTCTTTATGATTCTTTACCTGTTT
GTTTTGTAATCTCTTCTTATGCTCCTTGCCAGTTCATGTCTATCTTCAGA
ATAAGAATGACAAAAGGAAGAGAAAGTGGGCAGGAAGGAGGAACACTACA
CAGCACCGGCCTGATGGTTTCATTTCCCCAGTGGGCATTATTTTGCATTT
CCCCTTAAGCCATGTTATTGTCTGTTTAGCTTTAACCTAGTACATGGCTG
AACTCACTGAAAAAATATAGCACAGAATTCTAGCCCTGTTCTTTGCAATC
ACATAACTGAAATTTTGTGCATTTAATTTCAAAAATCTTCCTGATGTGGT
TAGTGTAGTTATGGCCTATATAACTTTTTACAGTGGTACTAACATCTTGA
TTTTTCATAGAAACTAATTCAGTACAACTTTACTTGAAGACCTTAAGCTT
CAGAGGGGACATGGTGTGGGAGCAGTAAGAGAAAAACAGCAATTGGAAGG
TATTTGTAATAGTTCACAACTGTTGTTGCTTGAATCTAAAACCTGAACTC
TGACTCCATTCAGTCATCACCTTTTGATCATTCCCCCGCGTTTTGGATGC
TGTGCCGACATGTCCTTCTTCTAAAATTTCTTCTTCTCCTTTTCTGTATC
TTTCCTTCCTCCCCTTGTTTTTTCTTCACTTTTTTCTCCCTTTTCCTTTC
CCTTATTTTCTC

TATTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGATACTGAATGGCTCAAAA
CACCTGAAAAATGTCAGCATCCTTATCATCAAGGAATGTAATCAAGCACC
TGAATTCNTTTCNNTNNNNTNTCCNCANAATGTTTANAATAAAATTCNGG
GAANNCAAATTTTGCAAGATGGTAGAAAGGAGAACCCCCCCCCTTTTTAT
TTATTTTCNTCTTTCAATCAANNNAGCTATTACACACAAGATGAAAAAAG
ACGAAAGGAGAGGGGGGGGGGGTGGGGGGGGGGCCGGGGGGGGGGGGGGG
GGGTGCGGCAGAGAAGAAGAAGAAAAAAGAAGAGAGAGCAAATACGAAGG
AAAAAGAACAGAGCGAGACGAGCAAAAGAGAAAATAGAAGAAGAAGAGAC
AGAGGGGGGGANNTTNNNNNNNNNNNNNNTTTNTTNNACAAAAAATGTGC
CGGCTTTTTTNNNNNNTNNNNNNNTNTNTTTTTTTTTTTTTCNNNNNACA
CCAAAAAAAAAAAACACAATAAAAAAAAANNNNNTTNNNNNNNNNNNNNT
TNNTNTNNTNTTNNNNNNNNNNNNNNNCCNNTCCCCCCCCCGCCGCCGCC
NTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTNNCTCTTCTTT
TTCTCCTCCCACCCCCG

Query= MSMg01no435_b15.b1 MSMg01no435_b15.b1 CHROMAT_FILE:
MSMg01no435_b15.b1 PHD_FILE: MSMg01no435_b15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:43 2005
         (452 letters)



>mm_chr13_84213950_84214801
          Length = 852

 Score =  832 bits (430), Expect = 0.0
 Identities = 447/454 (98%), Gaps = 4/454 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgggtcaattctttatgattctttacctgtttgttttgtaatctcttcttatgctccttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggtcaattctttatgattctttacctgtttgttttgtaatctcttcttatgctccttg 260

                                                                       
Query: 61  ccagttcatgtctatcttcagaataagaatgacaaaaggaagagaaagtgggcaggaagg 120
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 ccagttcatgtctatcttcagaataagaatgacaaaaagaagagaaagtgggcaggaagg 320

                                                                       
Query: 121 aggaacactacacagcaccggcctgatggtttcatttccccagtgggcattattttgcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggaacactacacagcaccggcctgatggtttcatttccccagtgggcattattttgcat 380

                                                                       
Query: 181 ttccccttaagccatgttattgtctgtttagctttaacctagtacatggctgaactcact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttccccttaagccatgttattgtctgtttagctttaacctagtacatggctgaactcact 440

                                                                       
Query: 241 gaaaaaatatagcacagaattctagccctgttctttgcaatcacataactgaaattttgt 300
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaaaaatatagcacggaattctagccctgttctttgcaatcacataactgaaattttgt 500

                                                                       
Query: 301 gcatttaatttcaaaaatcttcctgatgtggttagtgtagttatggcctatataact--t 358
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |  |
Sbjct: 501 gcatttaatttcaaaaatcttcctgatgtggttagtgtagttatgacctatata--taat 558

                                                                       
Query: 359 tttacagtggtactaacatcttgatttttcatagaaactaattcagtacaactttacttg 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tttacagtggtactaacatcttgatttttcatagaaactaattcagtacaactttacttg 618

                                             
Query: 419 aagaccttaagcttcagaggggacatggtgtggg 452
           ||||||||||||||||||||||||||||||||||
Sbjct: 619 aagaccttaagcttcagaggggacatggtgtggg 652


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space:   372164
Effective search space used:   372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)