Query= MSMg01no435_e24.b1 MSMg01no435_e24.b1 CHROMAT_FILE:
MSMg01no435_e24.b1 PHD_FILE: MSMg01no435_e24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:59 2005
(359 letters)
>mm_chr13_4730413_4731171
Length = 759
Score = 536 bits (277), Expect = e-156
Identities = 316/331 (95%), Gaps = 5/331 (1%)
Strand = Plus / Plus
Query: 5 gaattcacttgattttatctttgttgcaatgatactacacaagtgcccactttgtttgtt 64
||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 205 gaattcacttgatttcatatttgttgcaatgatactacacaagtgcccactttgtctgtt 264
Query: 65 ttcctattggaaattttagttttctgtaaaacagtagatttgaatcttgtgtcccttcaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcctattggaaattttagttttctgtaaaacagtagatttgaatcttgtgtcccttcaa 324
Query: 125 tatgtcaattgtacatttttctacactagtagtattatcacataagtgaattttaaagtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatgtcaattgtacatttttctacactagtagtattatcacataagtgaattttaaagtg 384
Query: 185 tgatcgatgatgaattcttttttctagttgtatgatggaatgagcccctgggatgacctt 244
|||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 385 tgatcgatgatgaattcttttttctagttgtatgataaaataagcccctgggatgacctt 444
Query: 245 agcaaagaaaagaattaaaaattatgaatattctaattattattacagaatagaaggaaa 304
|||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||
Sbjct: 445 agcaaagaaaagaattaaaaattatgaatattctaaatataatttcagaatagaaggaaa 504
Query: 305 gagaaagagaacagagaatgagagagagaga 335
|||| ||||| |||| ||||||||||||
Sbjct: 505 gagagagaga---gaga--gagagagagaga 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_e24.g1 MSMg01no435_e24.g1 CHROMAT_FILE:
MSMg01no435_e24.g1 PHD_FILE: MSMg01no435_e24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:59 2005
(355 letters)
>mm_chr13_4831880_4832634
Length = 755
Score = 671 bits (347), Expect = 0.0
Identities = 353/355 (99%)
Strand = Plus / Minus
Query: 1 ccatgactaccatgacagcattattcaaatgtattttctatcaaatactggaaaattgga 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ccatgactaccatgactgcattattcaaatgtattttctatcaaatactggaaaattgga 496
Query: 61 ttccttcaaaccatatctttaggaattcacatgcttctaggaaagtaatatcttggcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ttccttcaaaccatatctttaggaattcacatgcttctaggaaagtaatatcttggcaac 436
Query: 121 aaagtgaattatttcgatataatcattcattgaggataaaccaataaaaaattcagccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aaagtgaattatttcgatataatcattcattgaggataaaccaataaaaaattcagccca 376
Query: 181 ttttccataatgagtacaattcaagagggccataaaaaagtgtgtgtcaagaaattagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttttccataatgagtacaattcaagagggccataaaaaagtgtgtgtcaagaaattagct 316
Query: 241 ttgtgtcattgactccaatgtggaatagtgtataactaatgaaacaagtgacaagaaaaa 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ttgtgtcattgacaccaatgtggaatagtgtataactaatgaaacaagtgacaagaaaaa 256
Query: 301 taatgaaataccagagagaattaatatgctgcctttcccatttctaacagcgttt 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 taatgaaataccagagagaattaatatgctgcctttcccatttctaacagcgttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 755
Length adjustment: 9
Effective length of query: 346
Effective length of database: 746
Effective search space: 258116
Effective search space used: 258116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
