Query= MSMg01no436_i14.b1 MSMg01no436_i14.b1 CHROMAT_FILE:
MSMg01no436_i14.b1 PHD_FILE: MSMg01no436_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:38 2005
(400 letters)
>mm_chr13_103763337_103764133
Length = 797
Score = 596 bits (308), Expect = e-174
Identities = 379/418 (90%), Gaps = 31/418 (7%)
Strand = Plus / Minus
Query: 5 gaattctcctgtatgtc-cctgttaaacatgacatgtccatgctgtgatctggaaaacag 63
||||||||||| | ||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 502 gaattctcctgga-gtcaactgttagacatgacatgtccatgctgtgatctggaaaacag 444
Query: 64 ttatcttgcagtagaaagcctgcaacatataaagtgaaaaagaaaaaaaaaaccttaagt 123
||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||
Sbjct: 443 ttatcttgcagtagaaagcct-caacatataaagtgaaaaag--aaaaaaacccttaagt 387
Query: 124 gcaagtttatgcatttgtgatgttgggaaagtatgctatgttagccacagacagcacatt 183
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 386 gcaagtttatgcacttgtgatgttgggaaagtacgctatgttagccacagacagcacatt 327
Query: 184 ctgtatacccctttggacatctacattttctatatatctagaccttgtgtttcccccttt 243
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ctgtacacccctttggacatctacattttctatatatctagaccttgtgtttcccccttt 267
Query: 244 ctgctttagtattgttgatgttaatttatgtttacttccatgttgcttctgatgattgag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctgctttagtattgttgatgttaatttatgtttacttccatgttgcttctgatgattgag 207
Query: 304 ca------------------tgtgtgtgtgtgtgtgtgtgtgt----tcttatactatac 341
|| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 206 catgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcttataccatac 147
Query: 342 ctggctctggacaggatggtgtttaatataaatattataaagagagaggcctgcaaga 399
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 146 ctggctctggacaggatggtgtttaatataaatattata--gagaga--cctgcaaga 93
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 797
Length adjustment: 9
Effective length of query: 391
Effective length of database: 788
Effective search space: 308108
Effective search space used: 308108
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_i14.g1 MSMg01no436_i14.g1 CHROMAT_FILE:
MSMg01no436_i14.g1 PHD_FILE: MSMg01no436_i14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:38 2005
(404 letters)
>mm_chr13_103581577_103582380
Length = 804
Score = 719 bits (372), Expect = 0.0
Identities = 393/400 (98%)
Strand = Plus / Plus
Query: 5 aaataccagacactgagcactgagctatgcaccaggaaataagagaggacttgtggtctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aaataccagacactgagcactgagctatgcaccaggaaataagagaggacttgtggtctt 264
Query: 65 caaagggcttgctgatagaaatgtgaggcttccctcccttgccgtcctcaaatcttgtta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caaagggcttgctgatagaaatgtgaggcttccctcccttgccgtcctcaaatcttgtta 324
Query: 125 ggatccatcatgtggggactatagacacaggccatgctgtggtgtttgtcttaagccgaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggatccatcatgtggggactatagacacaggccatgctgtggtgtttgtcttaagccgaa 384
Query: 185 tggatatcaatgaaaagggctgagctattctcggagctgaacagatacctggatttgaat 244
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 385 tggatatcaatgaaaagggctgagctattctcagagctgaacagatacctggatttgaag 444
Query: 245 ttttatgtttggaaataagaagtctggtggagccaggtaacaacagaaaaggagagacag 304
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggttaggtttggaaataggaagtctggtggagccaggtaacaacagaaaaggagagacag 504
Query: 305 ggtggagaatctcgaggaagagtcaggacgatgctctgatgtagagagtagttgcctgat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggtggagaatctcgaggaagagtcaggacgatgctctgatgtagagagtagttgcctgat 564
Query: 365 gtatagaaagagatgatcctaactccgaatcctaccaagt 404
||| ||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtagagaaagagatgatcctaactccgaatcctaccaagt 604
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
