Query= MSMg01no436_j24.b1 MSMg01no436_j24.b1 CHROMAT_FILE:
MSMg01no436_j24.b1 PHD_FILE: MSMg01no436_j24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:45 2005
(512 letters)
>mm_chr13_73470000_73470911
Length = 912
Score = 897 bits (464), Expect = 0.0
Identities = 497/508 (97%), Gaps = 2/508 (0%)
Strand = Plus / Plus
Query: 6 gaattcagagatagtttcaataggtagctacaggagataaccattgccttttcctgggat 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcagagatagtttcaataggtagctacaggagataaccattgccttttcctgggat 265
Query: 66 cttaaaatagctgttgagaagtgctcacagcactaggtctgatagttgctaagcaagaac 125
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cttaaaatagccgttaagaagtgctcacagcactaggtctgatagttgctaagcaagaaa 325
Query: 126 gtttaagcagagatcctccagacaaggctttgaaaagagaggtcctggcaataatgttat 185
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 326 gtttaagcagagatcctccagacaagactttgaaaagagaggtcctggcaataatgttat 385
Query: 186 ttttaagggaggcagagaaaccatgtgctttgatctgttgccttttgaagggtttgtaca 245
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 386 ttttaagggaggcagagaaaccatgtgctttgatctgttgccttttgaagggtttgtata 445
Query: 246 agcttatctgtgaacctgaagcctgg-aggagagtctgaggacacagggagagcaaatgg 304
||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||
Sbjct: 446 agcttatctgtgaacctgaagcccgggag-agagtctgaggacacagggagagcaaatgg 504
Query: 305 caccttaataggacctagcacaaacgatagcaagttctctggttcatcattcacaccacg 364
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cgccttaataggacctagcacaaacgatagcaagttctctggttcatcattcacaccaca 564
Query: 365 tcacatgcggatggtgttcagtcctgaactctgcagtaagtttctgatgggcccagccag 424
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcacatgcggatagtgttcagtcctgaactctgcagtaagtttctgatgggcccagccag 624
Query: 425 caggaggtgaggcgcaggaacccacttagccagcagaagaccctgggccagggtgaccgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 caggaggtgaggcgcaggaacccacttagccagcagaagaccctgggccagggtgaccgg 684
Query: 485 accagcctggctgtaagcacccttccat 512
||||||||||||||||||||||||||||
Sbjct: 685 accagcctggctgtaagcacccttccat 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_j24.g1 MSMg01no436_j24.g1 CHROMAT_FILE:
MSMg01no436_j24.g1 PHD_FILE: MSMg01no436_j24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:45 2005
(467 letters)
>mm_chr13_73651295_73652161
Length = 867
Score = 857 bits (443), Expect = 0.0
Identities = 461/467 (98%)
Strand = Plus / Minus
Query: 1 tttctcccaaagtctgagttctcagggctgaagtcaatgcagaagccattgggagttggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tttctcccaaagtctgagttctcagggctgaagtcaatgcagaagccattgggagttggt 608
Query: 61 gctgggggtgtctgtgcacagctgtcaaaatgtgtctgatcagggtacaagtagtcctct 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 607 gctgggggtgtctgtgcacagctgtcgaaatgtgtctgatcagggtacaagtagtcctct 548
Query: 121 gcgtagtcggggtacatttccgcaaacccgcagaagtcatctgcaaagacaaggaagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gcgtagtcggggtacatttccgcaaacccgcagaagtcatctgcaaagacaaggaagctg 488
Query: 181 attattgggacccacgagagccccattaccaggcactggtcagagacccctgctagaaag 240
|||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 487 attattgggacccaagagagccccattaccaggcactggttagagatccctgctagaaag 428
Query: 241 gcgaatatttcaggaaaagtcgtcacccccaatgctggtacaggaatgacaattcctcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gcgaatatttcaggaaaagtcgtcacccccaatgctggtacaggaatgacaattcctcaa 368
Query: 301 gccagggcccaagtatagggtgccagggttctggtgctgaagccttcgggaaagcagctt 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 367 gccagggcccaagtatagggtgccagggttatggtgctgaagccttcgggaaagcagctt 308
Query: 361 caatggagctggggtgggtgtcctccccacaggggacccaggtcagaagtccctgcagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 caatggagctggggtgggtgtcctccccacaggggacccaggtcagaagtccctgcagct 248
Query: 421 tcttcaggggatccagtgctatgtgaggcgagagggtagcctggtgt 467
|||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 247 tcttcaggggatccagtgctatgtgaggggagagggtagcctggtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
