Query= MSMg01no436_l08.b1 MSMg01no436_l08.b1 CHROMAT_FILE:
MSMg01no436_l08.b1 PHD_FILE: MSMg01no436_l08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:51 2005
(464 letters)
>mm_chr13_80878543_80879407
Length = 865
Score = 862 bits (446), Expect = 0.0
Identities = 457/461 (99%), Gaps = 1/461 (0%)
Strand = Plus / Minus
Query: 5 gaattctaggttatcttcctgtgatttcaacatacaaaccaccatatcctatattaacac 64
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 665 gaattctaggttagcttcctgtgatttcaacatacaaaccaccatatactatattaacac 606
Query: 65 aacatggatttgctttcctttagcaatcagattggaaacataaatgtgtctcactgaatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aacatggatttgctttcctttagcaatcagattggaaacataaatgtgtctcactgaatt 546
Query: 125 aaattatgctatgcgaagtgttggcttgtttcctgttaattgttacaggtgggtttgtac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aaattatgctatgcgaagtgttggcttgtttcctgttaattgttacaggtgggtttgtac 486
Query: 185 ccttggcctttccagccacaacttacaaactgcctaaatatccacaggagaaattattca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ccttggcctttccagccacaacttacaaactgcctaaatatccacaggagaaattattca 426
Query: 245 aggttaagaagcaaataggtcattagttttctcatattctcatggctgccaggaagctca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aggttaagaagcaaataggtcattagttttctcatattctcatggctgccaggaagctca 366
Query: 305 ggacttcagtctgctcaggtgcataacaacttccccgtctgtgtacgtttattccagtgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggacttcagtctgctcaggtgcataacaacttccccgtctgtgtacgtttattccagtgt 306
Query: 365 tgtaagcattagcaatatgcgttcagggatcaaa-ttttttttggatctggacatagtat 423
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 305 tgtaagcattagcaatatgcgttcagggatcaaatttttttttggatctggacatagtat 246
Query: 424 atgttttaaataaaggagcaatgtanaagttgttctttaga 464
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 245 atgttttaaataaaggagcaatgtaaaagttgttctttaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 865
Length adjustment: 10
Effective length of query: 454
Effective length of database: 855
Effective search space: 388170
Effective search space used: 388170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_l08.g1 MSMg01no436_l08.g1 CHROMAT_FILE:
MSMg01no436_l08.g1 PHD_FILE: MSMg01no436_l08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:52 2005
(391 letters)
>mm_chr13_80720825_80721615
Length = 791
Score = 733 bits (379), Expect = 0.0
Identities = 388/391 (99%)
Strand = Plus / Plus
Query: 1 ctgaactttccaagacttttatcttgaaggggtgttggattgctttctcagctctgatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgaactttccaagacttttatcttgaaggggtgttggattgctttctcagctctgatcc 260
Query: 61 accttctgagtcctgaggtcagagccctcgctctaggctgactctcctctggcaaggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accttctgagtcctgaggtcagagccctcgctctaggctgactctcctctggcaaggaag 320
Query: 121 gtgtccaagggtctgtgtctcagctctgcctcctggctgaggatgaaggcctgaagagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgtccaagggtctgtgtctcagctctgcctcctggctgaggatgaaggcctgaagagac 380
Query: 181 cctcaccaagaagctctgttgttctattgcccatgtggtctcaggtgatcatgaggtcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctcaccaagaagctctgttgttctattgcccatgtggtctcaggtgatcatgaggtcct 440
Query: 241 gggtgtgctagggcccctgtggcatggagagtcctttggtgccctagacgcccttggcca 300
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggtgtgctaggggtcctgtggcatggagagtcctttggtgccctagacgcccttggcca 500
Query: 301 ggtttacgcagaagatggtgtggctggccctaacctgaatggatcccagcctctgatcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtttacgcagaagatggtgtggctggccctaacctgaatggatcccagcctctgatcct 560
Query: 361 ctggtctgggggtgttcctcagtccctgttc 391
||||||||||||||||||||| |||||||||
Sbjct: 561 ctggtctgggggtgttcctcaatccctgttc 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|