Query= MSMg01no437_b10.b1 MSMg01no437_b10.b1 CHROMAT_FILE:
MSMg01no437_b10.b1 PHD_FILE: MSMg01no437_b10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:20 2005
(512 letters)
>mm_chr13_47315961_47316873
Length = 913
Score = 917 bits (474), Expect = 0.0
Identities = 504/514 (98%), Gaps = 3/514 (0%)
Strand = Plus / Minus
Query: 1 ggtcccttgaggtaagtcactcacagcccctggacttcagttcccgtatctaagaaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 ggtcccttgaggtaagtcactcacagcccctggacttcagttcccgtatctaagaaaaca 756
Query: 61 cctgactttgtgaggcttgtggggaagattagctaataatacccaggccaaggaaggcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 755 cctgactttgtgaggcttgtggggaagattagctaataatacccaggccaaagaaggcca 696
Query: 121 ggagcaacgcctggggccgggcaggtgtcctgtcaggtgtcccctgtttatcgagtggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 ggagcaacgcctggggccgggcaggtgtcctgtcaggtgtcccctgtttatcgagtggac 636
Query: 181 agtttatttcatcggtttctagggagccttcttgggagattacaggttctcctagacaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 agtttatttcatcggtttctagggagccttcttgggagattacaggttctcctagacaag 576
Query: 241 agttcattatgctca-ggtgaacaggcactgaagatccagagcagatttcagggcagccc 299
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 agttcattatgct-agggtgaacaggcactgaagatccagagcagatttcagggcagcca 517
Query: 300 cgagggagggg-atcagacaaaagtgatgagataaactataacctggagccataggaaaa 358
||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 516 cgagggagggggatcagacaaaagccatgagataaactataacctggagtcataggaaaa 457
Query: 359 cctgctccaagaggatagacttatctgatgcccaaggcagcccagctgtgaggcctccct 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cctgctccaagaggatagacttatctgatgcccaaggcagcccagctgtgaggcctccct 397
Query: 419 ctctgctctttggaaatctttcaacctcagaccagctctgtgggaagctaccctaggaaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ctctgctctttggaaatctttcaacctcagaccagctctgtgggaagctaccctaggaaa 337
Query: 479 caaacaaacttgtaaagaaccacaatcgcttata 512
||||||||||| || |||||||||||||||||||
Sbjct: 336 caaacaaacttatagagaaccacaatcgcttata 303
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 913
Length adjustment: 10
Effective length of query: 502
Effective length of database: 903
Effective search space: 453306
Effective search space used: 453306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_b10.g1 MSMg01no437_b10.g1 CHROMAT_FILE:
MSMg01no437_b10.g1 PHD_FILE: MSMg01no437_b10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:20 2005
(168 letters)
>mm_chr13_47165367_47165934
Length = 568
Score = 255 bits (132), Expect = 8e-73
Identities = 142/146 (97%), Gaps = 2/146 (1%)
Strand = Plus / Plus
Query: 1 tataagtcatgtttaagcttaatttatttgaaaagttttgctgatatatgcatacatctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tataagtcatgtttaagcttaatttatttgaaaagttttgctgatatatgcatacatctg 260
Query: 61 tgtgaagttacggctgtattctacctttgagcatgtcagctatggacaatgtcagtacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgaagttacggctgtattctacctttgagcatgtcagctatggacaatgtcagtacat 320
Query: 121 agagtgtgtgtgtgtgtg--tgtgtg 144
| ||||||||||||||| ||||||
Sbjct: 321 ggggtgtgtgtgtgtgtgactgtgtg 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 568
Length adjustment: 8
Effective length of query: 160
Effective length of database: 560
Effective search space: 89600
Effective search space used: 89600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
