Query= MSMg01no437_i13.b1 MSMg01no437_i13.b1 CHROMAT_FILE:
MSMg01no437_i13.b1 PHD_FILE: MSMg01no437_i13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:57 2005
(190 letters)
>mm_chr13_92023596_92024186
Length = 591
Score = 335 bits (173), Expect = 1e-96
Identities = 185/189 (97%), Gaps = 1/189 (0%)
Strand = Plus / Minus
Query: 1 catggcggtggggggcgggg-ggggggacccagagggacaacacctgcctcctttcacca 59
|||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 389 catggcggtgggggttggggtggggggacccagagggacaacacctgcctcctttcacca 330
Query: 60 ccaaagatggaactgaactgtaaatctgtctccagcaacagtgaaacccagctccatgga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ccaaagatggaactgaactgtaaatctgtctccagcaacagtgaaacccagctccatgga 270
Query: 120 ccaaagacagataccccaggctggggtgggaaggtgtaaactttgaagcttacggaagct 179
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 269 ccaaagacagataccccaggctggggtgggaaggtgtaaactttgaagcttagggaagct 210
Query: 180 gatggcaca 188
|||||||||
Sbjct: 209 gatggcaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 591
Length adjustment: 8
Effective length of query: 182
Effective length of database: 583
Effective search space: 106106
Effective search space used: 106106
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no437_i13.g1 MSMg01no437_i13.g1 CHROMAT_FILE:
MSMg01no437_i13.g1 PHD_FILE: MSMg01no437_i13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:57 2005
(288 letters)
>mm_chr13_91876490_91877177
Length = 688
Score = 445 bits (230), Expect = e-129
Identities = 270/288 (93%), Gaps = 10/288 (3%)
Strand = Plus / Plus
Query: 5 cttttaaagcacgtttctagttgcagaatccagagaacacttcctagaccgaaaaccaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cttttaaagcacgtttctagttgcagaatccagagaacacttcctagaccgaaaaccaaa 264
Query: 65 ccagaaaaaggcagttctaaaaagagaatagaaaaaaatggttgaggtgacatatctctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 265 ccagaaaaaggcagttctaaaaagagaatagaaaaaaatggttgaggtgac--atctctg 322
Query: 125 taaacacagtacttgggaaactgaggcaggaggattgctacaagtttgattatggcctct 184
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 taaacacaatacttgggaaactgaggcaggaggattgctacaagtttgattatggcctct 382
Query: 185 agagattatcaggccatccaaggatacatgctctctaccttgaaaaacaaaataaaacca 244
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 383 agagattatcaggccatccagggatacatgcactctaccttgaaaaacaaaataaaacca 442
Query: 245 atacctttta----caggactggggaggaggaagggtagaaggggagg 288
|| | | |||||| |||||||| | ||||||||||||||||
Sbjct: 443 gtaac----aaaaacaggacaggggaggatgtagggtagaaggggagg 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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