Query= MSMg01no438_p05.b1 MSMg01no438_p05.b1 CHROMAT_FILE:
MSMg01no438_p05.b1 PHD_FILE: MSMg01no438_p05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:55 2005
(540 letters)
>mm_chr13_63947232_63948171
Length = 940
Score = 1007 bits (521), Expect = 0.0
Identities = 533/537 (99%), Gaps = 2/537 (0%)
Strand = Plus / Plus
Query: 5 gaattctttagag-attcgcgacctacctagtgttgttcctagtacctccttaatggcaa 63
||||||||||||| | | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttagagcact-gtgacctacctagtgttgttcctagtacctccttaatggcaa 263
Query: 64 cttttctgtcactgtcccatccagaatggagacttcccttttattttatttttttattag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cttttctgtcactgtcccatccagaatggagacttcccttttattttatttttttattag 323
Query: 124 atattttctttatttccttttcaaatgctatcccgaaagttccctattccttcctcccac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atattttctttatttccttttcaaatgctatcccgaaagttccctattccttcctcccac 383
Query: 184 cctgctccgctacccacccactcccacttcttggccctggcattcccctgtactagggca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctgctccgctacccacccactcccacttcttggccctggcattcccctgtactagggca 443
Query: 244 tataaagtttgcaagactaaggggcctcttttcccaatgatggccaactagggcatcttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tataaagtttgcaagactaaggggcctcttttcccaatgatggccaactagggcatcttc 503
Query: 304 tgctacatatgcagctagagacacaagctctgggggtactggttagttcatattgttgtt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgctacatatgcagctagagacacaagctctgggggtactggttagttcatattgttgtt 563
Query: 364 ccatctataggattgcagacccctttatctccttgggtactttctctagttcctccattg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccatctataggattgcagacccctttatctccttgggtactttctctagttcctccattg 623
Query: 424 ggggccctgtgttctatcctatagatgactgtaagcatccacttctgtgtttgccaggca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ggggccctgtgttctatcctatagatgactgtaagcatccacttctgtgtttgccaggca 683
Query: 484 ctggcatagcctcacaagagacagctatatcagggtcctttcagcaaaatcttgctg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctggcatagcctcacaagagacagctatatcagggtcctttcagcaaaatcttgctg 740
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 940
Length adjustment: 10
Effective length of query: 530
Effective length of database: 930
Effective search space: 492900
Effective search space used: 492900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_p05.g1 MSMg01no438_p05.g1 CHROMAT_FILE:
MSMg01no438_p05.g1 PHD_FILE: MSMg01no438_p05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:55 2005
(388 letters)
>mm_chr13_64032827_64033614
Length = 788
Score = 750 bits (388), Expect = 0.0
Identities = 388/388 (100%)
Strand = Plus / Minus
Query: 1 atgaatgcacttgcagggtcagagaacacagtatggctggagccccttcagctgtgcccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 atgaatgcacttgcagggtcagagaacacagtatggctggagccccttcagctgtgcccc 379
Query: 61 actgggggtcttgtgtgtgtccagtacatcccgagaaggggttttcgtttgcattttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 actgggggtcttgtgtgtgtccagtacatcccgagaaggggttttcgtttgcattttcag 319
Query: 121 tctttcgtctttacagtaagtgcatgtgggttttaaagtgataatcacacaagggttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tctttcgtctttacagtaagtgcatgtgggttttaaagtgataatcacacaagggttcca 259
Query: 181 catagatatatgttccatataagatgaccatctatccaggttaactgagtcctacatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 catagatatatgttccatataagatgaccatctatccaggttaactgagtcctacatgaa 199
Query: 241 tttaatttaataattaatttagtgactgtttggcagggtagcccaggacagttgtactaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tttaatttaataattaatttagtgactgtttggcagggtagcccaggacagttgtactaa 139
Query: 301 ctacttctctcttatctgtggtggcttacagttaatatggcagggaaggcgcgcctgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 ctacttctctcttatctgtggtggcttacagttaatatggcagggaaggcgcgcctgaag 79
Query: 361 gagcatgaggcgactggtcgcactgtgc 388
||||||||||||||||||||||||||||
Sbjct: 78 gagcatgaggcgactggtcgcactgtgc 51
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
