Query= MSMg01no439_e10.b1 MSMg01no439_e10.b1 CHROMAT_FILE:
MSMg01no439_e10.b1 PHD_FILE: MSMg01no439_e10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:21 2005
(436 letters)
>mm_chr13_38878315_38879151
Length = 837
Score = 745 bits (385), Expect = 0.0
Identities = 420/437 (96%), Gaps = 10/437 (2%)
Strand = Plus / Plus
Query: 1 caagttaagagaaatgctcaggtccccaaggctcagtagagtgagggacacagagaggat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 caagttaagagaaatgctcaggtccccaaggctcagtagagtgagggacacagagagga- 268
Query: 61 ggagaggagggatggattgacaattgggagtcaggagctgagaaaggaaatcaagcagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 --------gggatggattgacaattgggagtcaggagctgagaaaggaaatcaagcagat 320
Query: 121 acctccgatagctcagactcccttgagaaggtctaagacagttgggcacggtgtagggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctccgatagctcagactcccttgagaaggtctaagacagttgggcacggtgtagggga 380
Query: 181 agttgcaagtccctaacatactatagtgactttcgacctccaagtctcagcaatcccagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttgcaagtccctaacatactatagtgactttcgacctccaagtctcagcaatcccagg 440
Query: 241 aaggcctctttata-ccagggctcagtggatgaaagtgtgaagtgaggtcatagggtagc 299
|||||||| || | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggcctcagtaaaaccagggctcagtggatgaaagtgtgaagtgaggtcatagggtagc 500
Query: 300 ctgttgagtcctgcgtccaatgatgctcagtgagaaagcctgccaggagcgagttcgtga 359
|||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 501 ctgtcgagtcctgcgtccaatgatgctcagtgagaaagcctgccaggagtgagttcatga 560
Query: 360 tgaaatgggtcctcggcgggcagtgaccctaagactcagtaagtctgtgcggcctgagtc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaaatgggtcctcggcgggcagtgaccctaagactcagtaagtctgtgcggcctgagtc 620
Query: 420 tgcgctttcgaccagag 436
|| ||||||||||||||
Sbjct: 621 tgtgctttcgaccagag 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 837
Length adjustment: 9
Effective length of query: 427
Effective length of database: 828
Effective search space: 353556
Effective search space used: 353556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_e10.g1 MSMg01no439_e10.g1 CHROMAT_FILE:
MSMg01no439_e10.g1 PHD_FILE: MSMg01no439_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:21 2005
(235 letters)
>mm_chr13_39026033_39026668
Length = 636
Score = 441 bits (228), Expect = e-128
Identities = 234/236 (99%), Gaps = 1/236 (0%)
Strand = Plus / Minus
Query: 1 ttttcatcccagtctcttatctattaagtgcc-ttttcctattttaggaatctgtgcata 59
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 436 ttttcatcccagtctcttatctattaagtgcctttttcctattttaggaatctgtgcata 377
Query: 60 tcattttatatacttaagttacccagctaagcccagtggaaatgtggtctcgttagcatg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tcattttatatacttaagttacccagctaagcccagtggaaatgtggtctcgttagcatg 317
Query: 120 ggactgcatgaaaggggagtgtatgacggacgcagagtgactgactgggtgaatggtaca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 316 ggactgcatgaaaggggagtgtatgacggacgcagagtgactgactgggtgaagggtaca 257
Query: 180 caccagtgtggctgactgttagtggggtgtgagcaccaatgtgacagagtgggagc 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 caccagtgtggctgactgttagtggggtgtgagcaccaatgtgacagagtgggagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 636
Length adjustment: 9
Effective length of query: 226
Effective length of database: 627
Effective search space: 141702
Effective search space used: 141702
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
