NNAAAGAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCCCTGTCTATCCGATGTTGGAAGCAGAGTTTGAGATA
AAGCTAGATGAGTGGACTTTACTGAGAGAACATGCATTTATAACAAAGGT
ATGGAGAAGACTGCCAGGGATAAGCTGGGCTTCAGCTTGATCCCTTGGGG
AGATTGTAAGCAAGAATTATACTCCCCGGAGGCAGGAAGGGCAACCTTTT
GCTTTCTGTGCCAGTCTTGGATTATGGTCTCCCCTGAGAATGGGGAAGAT
GATGGAACCAAATTCAGTAGGTTTGCATGGTGGTGAGCACAAAACCCCAG
GTATACATCCAGGTAGCACAAAAGAGGAGACAGATTTAATCCCTCCAGCA
GGTAAAGAAAGCATGGGAGCTATTTCCAAAGAATGGCTTTCCTGAACAAA
GGAAGCATGAGGATTTCATTTGGGGGCCCAAGTGTGTCTGTAGAGGTGCA
TCTCTTCCTCCCCACTTGGTATGTGAGATAGGGTCAGGCACATCATAGAA
CACGTGCAGTAGGGGTACGTTCCTGAGCATTGCCAGGTTTCAAAAGAAAG
ATGGCAGAAACACTTTTAGGTTTGCTCAGTGTTGAGTCTTGAGTGCTCTC
CAACTTATTATTATTATTTTTTTTGCCTTTTAANAATTAGGTATTTTCCT
CATTTACATTTCCAATGCTATCCCAAAAGCCCCCCATAACCTCN

AATAGATAGTGATGATAATTACTAACNCCAGGCCGGCAGCGGTCCCTCTC
GTAATATGGGCGTGCGCCTCTATGCGGTACGCGCCACGCGCAGCTCTTCA
CTAGTTTGATGTCTACTCGCGCGCGAAAGCAAGATAGCGCGTATAGATAT
TCGTAAGTGGCTCGCGCCGTCAGCGCGCTACTGAGCAGCGGAGGCGGGTC
CTCTACGTTGCTTGTTGACTATCGACAAACGCGACATACACTTTCTAATA
CAGAGCAGCTCACATCGTGCGATGATACTAGCAGTACGAGGACAAGAGCG
AGATGCGTCTCCTTATATATGGTAATTAATATACTTACTAAGGAGTGAAT
TGAAGTAGTGTGTGGCGAGGCGGACAGGCTTCAGCGACGCGCTCGTGTCT
ATATTACGCTGACGCTGTGCTGCGGATATATCGTTGCCGCCGTCGGGGTA
CTAGCGGTCGAGGTCGATAGCGCGTGTGGAGTGGGTGTGTGGGTACTCAC
GCGTCCCGAATGGATAGAGGCTATCGTGCTGCGCTCGCTTCTTTAGAGTG
ACGACCGCGCGAAAGTATTAGAGAACTCTGCCTATCACCGGACGCTGGTG
GACGACGAGTGTTAGGGATAAGGGCATGGCTATACAAGCCACTCATCCCT
CATACAATATGCGTCTATCGTATTCCGACCACTCGCAGTCATGACACGTA
ATTTANCGCCGGACAGCGCGGAACGAACTGCCGCACACTCTGCACATCTT
GTAATTGTCTATTGATTGAAACTCTATTCCGCAGCAGACCTCTATCACAC
CTGCATGTGTAGGTGTCGAACGAACATGAACCAGTAGAACATGCGGATGA
ATCGTATTACATTTACCAGATGAGTAGCTGACGCTGCAGTCTCAACGTCA
CCCGGCGCATATCCATGCTGTGCTCCAGCAGTCAACTGGTCTCCGTTCAT
GCCGCGTGCCCGCTGTTAATGTCCTTCGACGATATAGTGATGAGAGTTGA
CATAATTGACTATTGCATGCGTGTGCCGGGCAGCTGGGGACGCATGACGG
CAACGGCGGTATACNCTGGATGTCTTCTAGATACCTGCGATNATGCTCTA
CANTATCTGACACTGTAGCTAAANCACTATGCGCGTAGATCTGTGATGCG
TAGCCCG

Query= MSMg01no440_c13.b1 MSMg01no440_c13.b1 CHROMAT_FILE:
MSMg01no440_c13.b1 PHD_FILE: MSMg01no440_c13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:29 2005
         (591 letters)



>mm_chr13_8772425_8773416
          Length = 992

 Score = 1021 bits (528), Expect = 0.0
 Identities = 573/588 (97%), Gaps = 1/588 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccctgtctatccgatgttggaagcagagtttgagataaagctagatgagtggact 64
           |||||||||||||| | |||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 792 gaattccctgtctagctgatgctggaagaagagtttgagataaagctagatgagtggact 733

                                                                       
Query: 65  ttactgagagaacatgcatttataacaaaggtatggagaagactgccagggataagctgg 124
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 ttactgagagaacatgcgtttataacaaaggtatggagaagactgccagggataagctgg 673

                                                                       
Query: 125 gcttcagcttgatcccttggggagattgtaagcaagaattatactccccggaggcaggaa 184
           ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 672 gcttcagcttgatccctcggggagattgtaagcaagaattatactccctggaggcaggaa 613

                                                                       
Query: 185 gggcaaccttttgctttctgtgccagtcttggattatggtctcccctgagaatggggaag 244
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gggcaaccttttgctttttgtgccagtcttggattatggtctcccctgagaatggggaag 553

                                                                       
Query: 245 atgatggaaccaaattcagtaggtttgcatggtggtgagcacaaaaccccaggtatacat 304
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 552 atgatggaaccaaattcagtaggtttgcatggtggtgagcacaaaactccaggtatacat 493

                                                                       
Query: 305 ccaggtagcacaaaagaggagacagatttaatccctccagcaggtaaagaaagcatggga 364
           ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 492 ccaggaagcacaaaagaggagacagatttaatccctccagcaggtaaggaaagcatggga 433

                                                                       
Query: 365 gctatttccaaagaatggctttcctgaacaaaggaagcatgaggatttcatttgggggcc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gctatttccaaagaatggctttcctgaacaaaggaagcatgaggatttcatttgggggcc 373

                                                                       
Query: 425 caagtgtgtctgtagaggtgcatctcttcctccccacttggtatgtgagatagggtcagg 484
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 372 caagtgtgtctgtagaggtgcatctcttcctcctcacttggtatgtgagatagggtcagg 313

                                                                       
Query: 485 cacatcatagaacacgtgcagtaggggtacgttcctgagcattgccaggtttcaaaagaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cacatcatagaacacgtgcagtaggggtacgttcctgagcattgccaggtttcaaaagaa 253

                                                           
Query: 545 agatggcagaaacacttttaggtttgctcagtgttgagtctt-gagtg 591
           ||||||  |||||||||||||||||||||||||||||||||| |||||
Sbjct: 252 agatggtggaaacacttttaggtttgctcagtgttgagtcttggagtg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 992
Length adjustment: 10
Effective length of query: 581
Effective length of database: 982
Effective search space:   570542
Effective search space used:   570542
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)