Query= MSMg01no440_p19.b1 MSMg01no440_p19.b1 CHROMAT_FILE:
MSMg01no440_p19.b1 PHD_FILE: MSMg01no440_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:37 2005
(466 letters)
>mm_chr13_70343022_70343887
Length = 866
Score = 756 bits (391), Expect = 0.0
Identities = 394/395 (99%)
Strand = Plus / Plus
Query: 72 gctgtctgctcttagggaccgttctctctagaactaactccacaggcacatccggaagtg 131
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gctgcctgctcttagggaccgttctctctagaactaactccacaggcacatccggaagtg 331
Query: 132 catccctaggttggtcccagattctgtcaagttgatagtcatgtttgaccatcacacaca 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 catccctaggttggtcccagattctgtcaagttgatagtcatgtttgaccatcacacaca 391
Query: 192 ggtcgcatgcactggctggctttttcctgttagcaattcctgtagcgcctggcactcaac 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ggtcgcatgcactggctggctttttcctgttagcaattcctgtagcgcctggcactcaac 451
Query: 252 acatgtttatcttgtctaattttcaaatgtgaacacatttcagagcagggaaagtgaagc 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 acatgtttatcttgtctaattttcaaatgtgaacacatttcagagcagggaaagtgaagc 511
Query: 312 tctgcctagggaagtttctggagtttcagtatcaacatattgctcagaagagaaacctgg 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tctgcctagggaagtttctggagtttcagtatcaacatattgctcagaagagaaacctgg 571
Query: 372 gttagcttaataaacaaggagaagtttaggaccttgattttctcctcttccactcttttc 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gttagcttaataaacaaggagaagtttaggaccttgattttctcctcttccactcttttc 631
Query: 432 tctcttttgcctctttccatctttaattacaataa 466
|||||||||||||||||||||||||||||||||||
Sbjct: 632 tctcttttgcctctttccatctttaattacaataa 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_p19.g1 MSMg01no440_p19.g1 CHROMAT_FILE:
MSMg01no440_p19.g1 PHD_FILE: MSMg01no440_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:37 2005
(496 letters)
>mm_chr13_70538519_70539415
Length = 897
Score = 861 bits (445), Expect = 0.0
Identities = 484/497 (97%), Gaps = 1/497 (0%)
Strand = Plus / Minus
Query: 1 cagtcctgacttccttagtgataaacagaagtatggaattgtaggctgaataaacccttt 60
|||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 818 cagtcctgacttccttggtgataaacagcagtatggaattgtaagctgaataaacccttt 759
Query: 61 cctccccaacttgcttcttggtcatgatgtttgtgcaggaatagaaaccctgactaagac 120
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 758 cctccctaacttgcttcttggtcatgatgtttgtgcaggaatagaaaccctgtctaagac 699
Query: 121 acacaccatggaatatttgttccaaatgtccttctgattctgcgtgcagaagatgtggcc 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 698 acacaccatggaatatttgttccaagtgtccttctgattctgcgtgcagaagatgtggcc 639
Query: 181 ccatattggcaacctgcacacttgtgtctcttcccatccctgcagggcttaactcgagcc 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 638 ccatattggcaacctgcacacttgtgtctcttctcatccctgcagggcttaactcaagcc 579
Query: 241 tttcttctgcctttgctgctaaagagggttctagtcttagaaagatcttcagcttaggta 300
||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 578 tttcttctgcctttgttgctaaagagggttctagtcttagaaagatctttagtttaggta 519
Query: 301 gaaaataaaaatggagatgctgccaactgctcctaaaactaatttttt-tatggattttt 359
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 518 gaaaataaaaatggagatgctgccaactgctcctaaaactaattttttatatggattttt 459
Query: 360 aaaatcaaaagtatagccttttatcagtatggcttaaggataccacatgacccagaaata 419
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 458 aaaatcaaaagtatagccttttatcagtatggtttaaggataccacatgacccagaaata 399
Query: 420 tatggagtggctttgagttctatttgctattattaaatgaacagatgttaccctgatgat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tatggagtggctttgagttctatttgctattattaaatgaacagatgttaccctgatgat 339
Query: 480 aatacataattcctttg 496
|||||||||||||||||
Sbjct: 338 aatacataattcctttg 322
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 897
Length adjustment: 10
Effective length of query: 486
Effective length of database: 887
Effective search space: 431082
Effective search space used: 431082
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
