Query= MSMg01no441_p15.b1 MSMg01no441_p15.b1 CHROMAT_FILE:
MSMg01no441_p15.b1 PHD_FILE: MSMg01no441_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:57 2005
(239 letters)
>mm_chr13_52504502_52505139
Length = 638
Score = 439 bits (227), Expect = e-128
Identities = 236/239 (98%), Gaps = 1/239 (0%)
Strand = Plus / Plus
Query: 1 ttgaacctgaggaaatggaaataagtgatcaggaattctggatattctctcaactcagaa 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 ttgaacctgaggaaatggaaataagtgattaggaattctggatattctctcaactcagaa 260
Query: 61 aacaatcagattcatgcctctgacagtatgcgaggaaaagccaaacaacaacaacgcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacaatcagattcatgcctctgacagtatgcgaggaaaagccaaacaacaacaacgcaca 320
Query: 121 gaatgatactcaacagacagagaagactttcagaacccatgtgggaccaaaattaaaaat 180
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 gaatgatactcaacagacggagaagactttcagaacccatgtgggac-aaaattaaaaat 379
Query: 181 gagacggatgacacaaacacttctgagaactcagtgacaacgccgagagcctgctggaa 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gagacggatgacacaaacacttctgagaactcagtgacaacgccgagagcctgctggaa 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 638
Length adjustment: 9
Effective length of query: 230
Effective length of database: 629
Effective search space: 144670
Effective search space used: 144670
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no441_p15.g1 MSMg01no441_p15.g1 CHROMAT_FILE:
MSMg01no441_p15.g1 PHD_FILE: MSMg01no441_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:57 2005
(511 letters)
>mm_chr13_52708339_52709249
Length = 911
Score = 895 bits (463), Expect = 0.0
Identities = 499/511 (97%)
Strand = Plus / Minus
Query: 1 ctagctcatgcagagtccagaagagggcactggatcccctgggattggagttagagacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 ctagctcatgcagagtccagaagagggcactggatcccctgggattggagttagagacag 825
Query: 61 ttgtgagccgctatgtgggtgctaagaattgaactcggctcttttggaaaaacagccagt 120
||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 824 ttgtgagccgccacgtgggtgctgagaattgaactcggctcttttggaaaaacagccagt 765
Query: 121 gctcttagccactgggccatcttttcagcaccttaattttttttttttaatatcagaagt 180
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 764 gctcttagctactgggccatcttttcagcaccttaaatttttttttttaatatcagaagt 705
Query: 181 aagaggaaattctttagctagatgcaaatgcagaggaaacacctatatttctaggaagac 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 aagagaaaattctttagctagatgcaaatgcagaggaaacacctatatttctaggaagac 645
Query: 241 aacctgattctgatcatgttgcctgactgtaaggccacacccctgaatctaagaacgttt 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aacctgatactgatcatgttgcctgactgtaaggccacacccctgaatctaagaacgttt 585
Query: 301 cactggaaggaatggggtggtggttcccagaaggcctctgtgtagggacacaggatgaca 360
|||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 584 cactggaaggaatggggtggtggttcccagaaggcctctgtgtagggacatggggtgaca 525
Query: 361 aatgcaggcattcctacagcactccctcggcaggtgcatctttacatgagaaggcttaac 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 524 aatgcaggcattcctacagcactccctcggcaggtgcatcgttacatgagaaggcttaac 465
Query: 421 cacacaaggacagctcccagcctctctgcaccccagaccactactctgctcagttacact 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 464 cacacaaggacagctcccagcctctctgcaccccagactactactctgctcagttacact 405
Query: 481 gcccaatttgctccagaaccttctgaattta 511
|||||||||||||||||||||||||||||||
Sbjct: 404 gcccaatttgctccagaaccttctgaattta 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
