Query= MSMg01no442_l10.b1 MSMg01no442_l10.b1 CHROMAT_FILE:
MSMg01no442_l10.b1 PHD_FILE: MSMg01no442_l10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:00 2005
(244 letters)
>mm_chr13_64525443_64526086
Length = 644
Score = 458 bits (237), Expect = e-133
Identities = 244/249 (97%), Gaps = 5/249 (2%)
Strand = Plus / Plus
Query: 1 gccttgaactcagagatctgcctgcctctgactcccaagtgctgttccccg-----cccc 55
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 196 gccttgaactcagagatctgcctgcctctgactcccaagtgctgttccccgccccccccc 255
Query: 56 ccccccaattcttattgttagttgttagcatagcttctttgcaattagccaggtgacttt 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ccccccaattcttattgttagttgttagcatagcttctttgcaattagccaggtgacttt 315
Query: 116 ctaacttggcagttggcttgtgatttgggagagggttgaatatgcaaggcttctaccctc 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ctaacttggcagttggcttgtgatttgggagagggttgaatatgcaaggcttctaccctc 375
Query: 176 tgcttatcggcctgtgcagtttagggaatctgtccaaagttcagcctgttcccatatcag 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tgcttatcggcctgtgcagtttagggaatctgtccaaagttcagcctgttcccatatcag 435
Query: 236 ccttgtctt 244
|||||||||
Sbjct: 436 ccttgtctt 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no442_l10.g1 MSMg01no442_l10.g1 CHROMAT_FILE:
MSMg01no442_l10.g1 PHD_FILE: MSMg01no442_l10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:00 2005
(245 letters)
>mm_chr13_64666469_64667113
Length = 645
Score = 474 bits (245), Expect = e-138
Identities = 245/245 (100%)
Strand = Plus / Minus
Query: 1 ttcggacagaaaactggtgaactggaaaacaagcaagatccaagtaacaattagtaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttcggacagaaaactggtgaactggaaaacaagcaagatccaagtaacaattagtaatgt 386
Query: 61 gttctaggagggttttgtgggactctggccccattctctttctctttttgatctcaagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttctaggagggttttgtgggactctggccccattctctttctctttttgatctcaagct 326
Query: 121 tatgatagaagcagtttgccctactatgtgctctggccatggttttttgcctcccctgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatgatagaagcagtttgccctactatgtgctctggccatggttttttgcctcccctgac 266
Query: 181 tcaaagaaatgaaaccgacccaccatgtataaggtccaaaaatcacttaaggaagactcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcaaagaaatgaaaccgacccaccatgtataaggtccaaaaatcacttaaggaagactcc 206
Query: 241 agact 245
|||||
Sbjct: 205 agact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
