Query= MSMg01no442_p08.b1 MSMg01no442_p08.b1 CHROMAT_FILE:
MSMg01no442_p08.b1 PHD_FILE: MSMg01no442_p08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:23 2005
(406 letters)
>mm_chr13_54966487_54967295
Length = 809
Score = 714 bits (369), Expect = 0.0
Identities = 395/405 (97%), Gaps = 3/405 (0%)
Strand = Plus / Minus
Query: 5 gaattcactaagttacaggagaaaggagaagacagcgctcaagatcccagagtgctcagt 64
||||||||||||| | ||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 609 gaattcactaagtgagaggagaaaggagaagacagtgctcaagatcccagaatgctcagt 550
Query: 65 tttcttctgcgctt---ctccagaaacccaaggcctggccaaggaaagcaggcagaaagg 121
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tttcttctgcgcttctcctccagaaacccaaggcctggccaaggaaagcaggcagaaagg 490
Query: 122 tggcatgaccatgggtcctagggaccacaggcctgtatgaactgtaggcatgaactgtat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tggcatgaccatgggtcctagggaccacaggcctgtatgaactgtaggcatgaactgtat 430
Query: 182 acactgtgggcatctatagctcaatgccaaagcaaagttccctgtctacagtcacacatc 241
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 429 acactgtgggcatctatagctcaatgccaaagcaaagtcccctgtctacagtcacacatc 370
Query: 242 tcttctgaagtacagacatggaggcagtcaaaggaaccctctttgctgctggtatgtccc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tcttctgaagtacagacatggaggcagtcaaaggaaccctctttgctgctggtatgtccc 310
Query: 302 taatgccagtgaggagtcaataaaacacggtcacatgtcactaacaatagcagaggaccg 361
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 taatgccagtgaggagtcactaaaacacggtcacatgtcactaacaatagcagaggaccg 250
Query: 362 catcatcaggtgacttaattacaccaactgtagggaatacatggt 406
|||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 249 catcatcaggtgacttaactacaccaactgtagggaatacatggt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 809
Length adjustment: 9
Effective length of query: 397
Effective length of database: 800
Effective search space: 317600
Effective search space used: 317600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_p08.g1 MSMg01no442_p08.g1 CHROMAT_FILE:
MSMg01no442_p08.g1 PHD_FILE: MSMg01no442_p08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:23 2005
(411 letters)
>mm_chr13_54897009_54897819
Length = 811
Score = 772 bits (399), Expect = 0.0
Identities = 408/411 (99%)
Strand = Plus / Plus
Query: 1 caaggagctgacattgtcagggagggcactggagcaggggtgggctgatcaaggtggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaggagctgacattgtcagggagggcactggagcaggggtgggctgatcaaggtggaag 260
Query: 61 aggggcgggggatctgagctgaggtgggcaggccgagcttggtctcgtgtctcctcagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggggcgggggatctgagctgaggtgggcaggccgagcttggtctcgtgtctcctcagga 320
Query: 121 gctcgagcagcagggctccatctacaccaaaggctgtgtgggccagtttgagaagtggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctcgagcagcagggctccatctacaccaaaggctgtgtgggccagtttgagaagtggct 380
Query: 181 acaagacaacctgatcgtggtggccggggtcttggtggggatcgccctcctccaggtaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaagacaacctgatcgtggtggccggggtcttggtggggatcgccctcctccaggtaca 440
Query: 241 gccttgttttgtccaccctcctcctgcctgaagctctttcttcttcctcacctgctctct 300
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccttggcttgcccaccctcctcctgcctgaagctctttcttcttcctcacctgctctct 500
Query: 301 gtcttgcagatatttggcctctgcttggcccagaacctcgtgagtgacatcaaggcggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcttgcagatatttggcctctgcttggcccagaacctcgtgagtgacatcaaggcggtg 560
Query: 361 aaggccaactggtgaggctgccaggggtgatggccatgtgcctggcccgtg 411
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggccaactggtgaggctgccaggggtgatggccatgtgcctggcccgtg 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
