Query= MSMg01no443_c17.b1 MSMg01no443_c17.b1 CHROMAT_FILE:
MSMg01no443_c17.b1 PHD_FILE: MSMg01no443_c17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:41 2005
(295 letters)
>mm_chr13_5597462_5598156
Length = 695
Score = 547 bits (283), Expect = e-160
Identities = 292/295 (98%)
Strand = Plus / Minus
Query: 1 taatttttgtagcctcattttcctcatgcttaattgggttgattgatgagcctcattaac 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 taatttttatagcctcattttcctcatgcttaattgggttgattgatgagcctcattaac 594
Query: 61 cagtttgttaaaaacatgccccgtttccacagtgcagtgtatgtttcgtgctaacttaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 cagtttgttaaaaacatgccccgtttccacagtgcagtgtatgtttcgtgctaacttaat 534
Query: 121 caatgccagtgttttgtgttatgtcagcaagatttagaaagtatcttcagggaatcagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 caatgccagtgttttgtgttatgtcagcaagatttagaaagtatcttcagggaatcagat 474
Query: 181 gatgctgtgctttttcttataagtttgaccaagaagaagaaattgtaaagctttcccaat 240
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gatgctgtgcttttccttataagtttgaccaagaagaagaaattgtaaagctttcccaac 414
Query: 241 gtttgtgctcaaaagctatttctctgcctatttattattactagaattattattt 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gtttgtgctcaaaagctatttctctgcctatttattattactagaattattattt 359
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no443_c17.g1 MSMg01no443_c17.g1 CHROMAT_FILE:
MSMg01no443_c17.g1 PHD_FILE: MSMg01no443_c17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:41 2005
(495 letters)
>mm_chr13_5479539_5480433
Length = 895
Score = 926 bits (479), Expect = 0.0
Identities = 491/495 (99%)
Strand = Plus / Plus
Query: 1 ttttgcccttccctattttttaagacatttagtatttgggacactgaacaccagatctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttgcccttccctattttttaagacatttagtatttgggacactgaacaccagatctaa 260
Query: 61 gtaccatgaagtgaacaaagcaaaaggagagaatctgtagcctgagagatgaagaagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaccatgaagtgaacaaagcaaaaggagagaatctgtagcctgagagatgaagaagagc 320
Query: 121 tagaaggaattaagttgattcaaaacaatcacagtggctctgtttgtcttaagacgaatt 180
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 cagaaggaattaagttgattcaaaacaatcacagtggctctgtttggcttaagacgaatt 380
Query: 181 atcttctctgtagatattcttcctttctcagtgtaaggacaacatgaatctcagggaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcttctctgtagatattcttcctttctcagtgtaaggacaacatgaatctcagggaaga 440
Query: 241 attgtacagtctgtgatgaaagggaaagtaactgcaagagaaatataaatttcaaaaggg 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attgtacagtcagtgatgaaagggaaagtaactgcaagagaaatataaatttcaaaaggg 500
Query: 301 aaagggaaaacgttacttctgggaaagtctctaaattgagagaacaaactgtgacttgag 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaagggaaaacggtacttctgggaaagtctctaaattgagagaacaaactgtgacttgag 560
Query: 361 gaatacagatgctggtggaaaaatgacacaaggcatactaatactctgtagcctccccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaatacagatgctggtggaaaaatgacacaaggcatactaatactctgtagcctccccca 620
Query: 421 gccttgagtagcctggctttaaccttgctgccactgagtatgagaccacctggggtggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gccttgagtagcctggctttaaccttgctgccactgagtatgagaccacctggggtggaa 680
Query: 481 ccttcctatttagat 495
|||||||||||||||
Sbjct: 681 ccttcctatttagat 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
