TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTTGTTTATCTCTGTACCCCATTTTTTGTATGCAATCTTTTATTCTTAC
TAGATATTTTCTTTATATACATTCCAAATGCTATTCCGAAAGTTCCCTAT
TCCCTCCCTCTGCCCTGCTCCCCTACCCACACACTCCCACTTCTTGGCCC
TGGCATTCCCCTGTTGTGGGGCATATAAAGTTTGCAATACCAAGGGGCCT
CTCTTCCCAGTGATGGCCGACTAGGCCATTTTCTGCTACATATGCAGCTA
GAGACATGAGCTCTTGGGGTACTGGTTAGTTCAAATTGTTGTTTCACCTA
TAGGGTTGTAGACCCCTTCAGCTCCTTGGGTGCTTTCACTAGCATAGAAC
ATCCAAGATATAATTTGCAATACACAAGAAAATCATGAAGAGGGAAGACC
AATGGGTGGATACTTCATTCCTCCTTAGAATAGGGAACAAAATACCCATG
AAAGGAGTCACACAGACAAAGTTTGGAGACTAGACGAAAGGACGGACCAT
CCAGATACTACCTCACCCGGATAATCATCCCATAAACAGCCCTCAAAATC
AGAAATTATTGGATATGCCCGCACAATATTTGTTGAAAGGTATCCCGCCA
AACCCGGCCTCCAAGGAGGGAAAGTCAGTGGGCTGCCTCTAATATTAAAG
GGCTTGTTCCCTTTCCTCTACCATTAGCCTTACACTTCCGCCCCCTTTGC
GGTAAAACCA

NNCCCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTACCAGCGAAAATCCTGATAGCGCTGGACAGGCAC
CAGGAATATGGGTCTGTTCTGAGGGAATGATCAAAGAGACAGAGATTTAA
GGTCTGTGCAGTAGGAGGTAACAACCCCCAGCACTAAGAATGGTTTTCAT
TATTAGATATCAATCATTCATTTCCCCCCAAAGCTGAAGGCTGTATCCAC
ATTCTTTTTCCAAAAAAAAAAAAAAAAAAAAGTGGGTGGGGGGAGCCTTT
CTTTGTTTTGCAAGTCCTTTGTTAATATTTTCTGCTGTTCTACAAATATG
CACTTCAACTGGAGATTAACTGTATTGTCAATAGATCATTCAAAACTTAA
AGTATTCTTTGTAAGCCTATTATTAGAGATTAGTGCATTATTTAGGCATT
AGGTTATCATTACTGGAGAACAACATACACTTGTCAGAATGAACTATTCT
AAAGCTATCACATCTCATACACACTGTCTTTATTTTTTAAAAATTGTAAT
TTTGTAGATGTCAATTATCTTATAAACTGTTTTAGAATAGTCTACTGAAA
TGAAGCGGCTTCTGCCATATTTTGCTTATATTTTCCAGTATGAATCCCAT
CATCTGATTTTTTATGAGAATTACAGAAATAACCTAACTGTATCCTACCG
TGAGCCAAATTTATTTCACTATTATT

Query= MSMg01no444_k02.g1 MSMg01no444_k02.g1 CHROMAT_FILE:
MSMg01no444_k02.g1 PHD_FILE: MSMg01no444_k02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:35 2005
         (503 letters)



>mm_chr13_77401923_77402825
          Length = 903

 Score =  884 bits (457), Expect = 0.0
 Identities = 490/503 (97%), Gaps = 7/503 (1%)
 Strand = Plus / Minus

                                                                       
Query: 4   tgatagcgctggacaggcaccaggaatatgggtctgttctgagggaatgatcaaagagac 63
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 903 tgatagcgctggacaggcaccaggaatatgggtctgttcagagggaatgatcaaagagac 844

                                                                       
Query: 64  agagatttaaggtctgtgcagtaggaggtaacaacccccagcactaagaatggttttcat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 agagatttaaggtctgtgcagtaggaggtaacaacccccagcactaagaatggttttcat 784

                                                                       
Query: 124 tattagatatcaatcattcatttccccccaaagctgaaggctgtatccacattctttttc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 783 tattagatatcaatcattcatttccccccaaagctgaaggctgtatccacattcactttc 724

                                                                       
Query: 184 caaaaaaaaaaaaaaaaaaaagtgggtggggggagcctttctttgttttgcaagtccttt 243
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 c-aaaaaaaaaaaaaaaaaaagtgggtggggggagcctttctttgttttgcaagtccttt 665

                                                                       
Query: 244 gttaatattt---tctgctgttctacaaatatgcacttcaactggagattaactgtattg 300
           |  || || |   |||||||||||||||||||||||||||||||||||  ||||||||||
Sbjct: 664 g--aa-atgtacatctgctgttctacaaatatgcacttcaactggagacgaactgtattg 608

                                                                       
Query: 301 tcaatagatcattcaaaacttaaagtattctttgtaagcctattattagagattagtgca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tcaatagatcattcaaaacttaaagtattctttgtaagcctattattagagattagtgca 548

                                                                       
Query: 361 ttatttaggcattaggttatcattactggagaacaacatacacttgtcagaatgaactat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ttatttaggcattaggttatcattactggagaacaacatacacttgtcagaatgaactat 488

                                                                       
Query: 421 tctaaagctatcacatctcatacacactgtctttattttttaaaaattgtaattttgtag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tctaaagctatcacatctcatacacactgtctttattttttaaaaattgtaattttgtag 428

                                  
Query: 481 atgtcaattatcttataaactgt 503
           |||||||||||||||||||||||
Sbjct: 427 atgtcaattatcttataaactgt 405


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space:   440249
Effective search space used:   440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)