MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-447D13
Chromosome	13 (Build37)
Map Location	19,852,869 - 19,853,326
singlet/doublet	singlet
Overlap gene	Gpr141
Upstream gene	Vps41, Amph, LOC624044, Tcrg-V4, LOC624071, Tcrg, Tcrg-C, Stard3nl, Epdr1, Sfrp4, Txndc3, A530099J19Rik
Downstream gene	LOC432730, Elmo1, LOC100040226, LOC665381, LOC665386
Link	Open Mouse BAC browser

Click to get alignment info.

name	Vps41 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218035 MGI:1929215
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Amph (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218038 MGI:103574
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC624044 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624044
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Tcrg-V4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21638 MGI:98634
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 4 Proteins

name	LOC624071 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tcrg (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434531
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 11 Proteins

name	Tcrg-C (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432729 MGI:98624
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 ESTs, 5 Proteins

name	Stard3nl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76205 MGI:1923455
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Epdr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105298 MGI:2145369
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sfrp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20379 MGI:892010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Txndc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73412 MGI:1920662
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A530099J19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319293 MGI:2441809
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr141 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:353346 MGI:2672983
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC432730 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:432730
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 134 ESTs, 6 Proteins pseudo : _no_value

name	Elmo1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140580 MGI:2153044
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100040226 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040226
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC665381 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665381
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins pseudo : _no_value

name	LOC665386 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 2 Proteins pseudo : _no_value

name	Vps41 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801712 GeneID:218035 MGI:1929215
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vacuolar protein sorting 41 (yeast) transcript_id : NM_172120.3

name	Amph (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41281851 GeneID:218038 MGI:103574
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : amphiphysin transcript_id : NM_175007.1

name	LOC624044 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94394718 GeneID:624044
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to amphiphysin I variant CT4 transcript_id : XM_888730.2

name	LOC624071 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:124486816 GeneID:624071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : similar to T-cell receptor gamma chain C region C7.5 transcript_id : NM_001081305.1

name	Tcrg (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263911 GeneID:434531
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 6 Proteins product : T cell receptor gamma chain transcript_id : XM_001475087.1

name	Tcrg-C (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263913 GeneID:432729 MGI:98624
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 ESTs, 3 Proteins product : T-cell receptor gamma, constant region, transcript variant 1 transcript_id : XM_001475166.1

name	Tcrg-C (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263915 GeneID:432729 MGI:98624
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 ESTs, 2 Proteins product : T-cell receptor gamma, constant region, transcript variant 2 transcript_id : XM_001475188.1

name	Stard3nl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70794798 GeneID:76205 MGI:1923455
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : STARD3 N-terminal like transcript_id : NM_024270.2

name	Epdr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372189 GeneID:105298 MGI:2145369
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ependymin related protein 1 (zebrafish) transcript_id : NM_134065.3

name	Sfrp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803390 GeneID:20379 MGI:892010
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secreted frizzled-related sequence protein 4 transcript_id : NM_016687.2

name	Txndc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31795582 GeneID:73412 MGI:1920662
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin domain containing 3 (spermatozoa) transcript_id : NM_181591.2

name	A530099J19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354396 GeneID:319293 MGI:2441809
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A530099J19 gene transcript_id : NM_175688.3

name	Gpr141 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384476 GeneID:353346 MGI:2672983
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 141 transcript_id : NM_181754.3

name	Elmo1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:17933765 GeneID:140580 MGI:2153044
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : engulfment and cell motility 1, ced-12 homolog (C. elegans) transcript_id : NM_080288.1

name	Elmo1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37693522 GeneID:140580 MGI:2153044
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : engulfment and cell motility 1, ced-12 homolog (C. elegans) transcript_id : NM_198093.2

name	Vps41 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559894 CCDS:CCDS26257.1 GeneID:218035 MGI:1929215
definition	GO_component : GO:0005905 - coated pit [Evidence IEA]; GO:0005769 - early endosome [Evidence IDA]; GO:0005770 - late endosome [Evidence IDA]; GO:0005874 - microtubule [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008017 - microtubule binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : vacuolar protein sorting 41 protein_id : NP_742118.2

name	Amph (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281852 CCDS:CCDS26258.1 GeneID:218038 MGI:103574
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007612 - learning [Evidence IMP]; GO:0048488 - synaptic vesicle endocytosis [Evidence IMP] codon_start : 1 product : amphiphysin protein_id : NP_778172.1

name	LOC624044 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82949658 GeneID:624044
definition	codon_start : 1 product : similar to amphiphysin I variant CT4 protein_id : XP_893823.1

name	Tcrg-V4 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:21638 MGI:98634
definition	codon_start : 1 exception : rearrangement required for product

name	LOC624071 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:124486817 GeneID:624071
definition	codon_start : 1 product : similar to T-cell receptor gamma chain C region C7.5 protein_id : NP_001074774.1

name	Tcrg (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263912 GeneID:434531
definition	codon_start : 1 product : similar to T cell receptor gamma MNG8 protein_id : XP_001475137.1

name	Tcrg-C (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263914 GeneID:432729 MGI:98624
definition	codon_start : 1 product : similar to Tcell receptor gamma chain isoform 1 protein_id : XP_001475216.1

name	Tcrg-C (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263916 GeneID:432729 MGI:98624
definition	codon_start : 1 product : similar to Tcell receptor gamma chain isoform 2 protein_id : XP_001475238.1

name	Stard3nl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70794799 CCDS:CCDS26259.1 GeneID:76205 MGI:1923455
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : MLN64 N-terminal homolog protein_id : NP_077232.2

name	Epdr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542612 CCDS:CCDS26260.1 GeneID:105298 MGI:2145369
definition	codon_start : 1 exception : mismatches in translation note : mammalian ependymin related protein 1; upregulated in colorectal cancer gene 1; ependymin related protein 2 product : ependymin 2 protein_id : NP_598826.2

name	Sfrp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710094 CCDS:CCDS26261.1 GeneID:20379 MGI:892010
definition	GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : secreted frizzled-related sequence protein 4 protein_id : NP_057896.1

name	Txndc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31712004 CCDS:CCDS26262.1 GeneID:73412 MGI:1920662
definition	GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : thioredoxin domain containing 3 (spermatozoa) protein_id : NP_853622.1

name	A530099J19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28316796 GeneID:319293 MGI:2441809
definition	GO_function : GO:0045028 - purinergic nucleotide receptor activity, G-protein coupled [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC319293 protein_id : NP_783619.1

name	Gpr141 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84662743 CCDS:CCDS26264.1 GeneID:353346 MGI:2672983
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0045028 - purinergic nucleotide receptor activity, G-protein coupled [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : G protein-coupled receptor 141 protein_id : NP_861419.2

name	Elmo1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17933766 CCDS:CCDS26265.1 GeneID:140580 MGI:2153044
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] [Evidence ISS]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS] [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence ISS]; GO:0030029 - actin filament-based process [Evidence IDA]; GO:0006915 - apoptosis [Evidence IEA] [Evidence ISS]; GO:0006928 - cell motility [Evidence ISS]; GO:0006909 - phagocytosis [Evidence IDA]; GO:0006911 - phagocytosis, engulfment [Evidence ISS]; GO:0016601 - Rac protein signal transduction [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : engulfment and cell motility 1 isoform 1 protein_id : NP_525027.1

name	Elmo1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37674226 GeneID:140580 MGI:2153044
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] [Evidence ISS]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS] [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence ISS]; GO:0030029 - actin filament-based process [Evidence IDA]; GO:0006915 - apoptosis [Evidence IEA] [Evidence ISS]; GO:0006928 - cell motility [Evidence ISS]; GO:0006909 - phagocytosis [Evidence IDA]; GO:0006911 - phagocytosis, engulfment [Evidence ISS]; GO:0016601 - Rac protein signal transduction [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : engulfment and cell motility 1 isoform 2 protein_id : NP_932761.1

name	LOC100040226 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040226
definition	number : 1 pseudo : _no_value

name	LOC100040226 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040226
definition	number : 2 pseudo : _no_value

name	LOC100040226 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040226
definition	number : 3 pseudo : _no_value

name	LOC100040226 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040226
definition	number : 4 pseudo : _no_value

name	LOC100040226 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040226
definition	number : 5 pseudo : _no_value

name	LOC100040226 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040226
definition	number : 6 pseudo : _no_value

name	LOC100040226 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040226
definition	number : 7 pseudo : _no_value

name	LOC100040226 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040226
definition	number : 8 pseudo : _no_value

name	Tcrg-V4 (CDS detail)
type	C_region
link	vega ensembl
xref	GeneID:21638
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 4 Proteins standard_name : Tcrg-V4

name	LOC432730 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263917 GeneID:432730
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 134 ESTs, 6 Proteins product : similar to FUS interacting protein (serine-arginine rich) 1 pseudo : _no_value transcript_id : XR_032194.1

name	LOC665381 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263918 GeneID:665381
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_032227.1

name	LOC665386 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263919 GeneID:665386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 2 Proteins product : similar to prothymosin, alpha (gene sequence 28) pseudo : _no_value transcript_id : XR_032236.1

clone name	MSMg01-400D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125J08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-075H05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-305H03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-497N23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-428J02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-070F08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-533N13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-539H18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-137O20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-487D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477H01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-381D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268J03
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-447D13.T7 (MSMg01no447_d13.b1)	MSMg01-447D13.TJ (MSMg01no447_d13.g1)
ACC	AG535730	AG535731
length	735	1,112
length of high quality (start - end)	458 (77 - 534)	---
definition	CHROMAT_FILE: MSMg01no447_d13.b1 PHD_FILE: MSMg01no447_d13.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:16:02 2005	CHROMAT_FILE: MSMg01no447_d13.g1 PHD_FILE: MSMg01no447_d13.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:16:02 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TTTTCTATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XCGCGGAATTCTTAGATTTTGACAGTGCCTCTGAAAAATGACTTCATTTT ATCTTCATTTAAAGATACACTTTAATGGCATAGCAGCATAGAATAAGGCT TTCTTCCAGCATGGTAAAGATGCTGTGTCATCATACTCTAGCCTTCATCA TTGGTACTTAGGCCACTGATGCAGCTGCTGCATCTGTTAATGTTGTACTT CTTTTTTCTTAAGCTTTATGTCAAGTAGATGATTTTCTTTGTGCTGAGCA TAGTCTTGTGTCTGTGGGTTTTTCTCTGATTGTTCTGATTGAAATTCCTC TTGTTTCTTAAGTGAACTAGTTGATGTCCTTTCTAACCTGAAGGAAGGCC TCACCTATGACCCTAGAGACACTGTTTTGTTCCAATTCATTCTTTCTTCT CACAGTTCAAATATACTTATGCTAGACATTTTCAGTGTTTCTCTTAAAGC TCTACTTTTTCCAACTCTTCTCCTATCTGGGTGTTTTCAGTCATTCTCGT TCACTTCTTTTATAACTAGCTATGTCTTTTCAATTAAAACAACTGTGTTC ATAGAGAAATCCTTTCTGTTCTAGACTGCTTACTTTGATTAATAATTTTA ATTGGCTTTTGAACCTTTTCTCTAAAGTATTTTATATCTTATACCCTTCC AATTTCCTAAACAATTTTTTACAACCTTGGAACCC	CTGTGTGTGTGTGTATATGGGTGCTGTGGTGGTCCTAGCGTTCGAACGCG CGTGTCCCCTTTCTCCAAAGACTGCGGGCGGGTGCTTCTGTCGTTCATCT TTTTCCGCCTCTCATCTGGTTTCCGCCTATGTGGAGTCTGCGCCTCCCCC ATTGCTCTCTTCCTCTGCGCCGTTCTGCGTTCTGCGGCCGTGATTGGTGC GCTGAAGCACCGAGCTCTTGTTTTACTTACGTCTCTCTCCCATCTATCTT ACATCGCCTTGCTACTTAGTAGCTAGATCACGACGCTATAAACGCAAGCA TTCATACGGAACGCGCGATACTACGATAACAATAACAGTTAACCCGTTTC CACCTTCCTTTCTGATTGTGTCTGGTTCGTCGCGTCGTGTGCATCGTTCG TGCTCGTCCGCGCTGCGCCTCCTCCTACACATTCTGCCATGCACCGTTAT CATATCCTCGTGCATACCTTAGACTTCAGAGACTCATTAGAAGTAGGAAC GCCTGATTATCTGAGCCTGCTCGCGCCCCGTCTCAGCGTGTCCTGCTCGC CTCAGCTAGTGCATGTTCGCCGCCTTCAGGACATTCCACCCGCACACACT GTCCACCCAGTCATCACGCTTGACAATTGCTAGAGATCCGTCAGTCGGCC AGTGTCGGGATCAACTCTCAATTTCCGTGGACTGTGAGCTATCGTTTCGT GCTATCTATGAGCCTGTATTGCGCATAATGCCCTGCCAGAACGTCGCCGC GGACCGAAGTGCCTTTTCCGTCACTTATACTGATCTTCATGTTCAGCGCG ATATGACGTATGCGTCTTGTTCGGGTGACCGTGTGAGAGCTAGCTCGTGC GGTGCCGTTATGCCGGCTCCCGTCGACTATCATATTCACCACTGATTCGC GCCAATCTTTTCGTGCGAGTCGCCATTGCGCTGTGGCTACCGTAGACCAC GCACCTAGTACTCGTAACGTTCACCCTAGTCACGAATCCGCGCGATCCTT CATGCGCCGTTTAATCCCACTCACACGTTATTTTCTATTGTTGTCGTTGC GTTCTGTGTTTACTACTGATCGTAATGATCATTAGCCACTCTATATCTTA TCTCTGTGTATN
quality values	Open. Hide. 7 7 7 7 8 8 7 7 8 8 8 13 9 9 10 21 13 13 13 19 15 15 13 15 17 26 22 21 30 30 35 19 19 12 12 12 10 13 9 9 9 12 9 10 10 11 8 8 11 11 19 23 43 39 37 24 24 17 21 30 37 23 23 14 14 9 15 13 23 10 8 8 8 11 10 12 18 24 28 39 37 37 32 29 32 19 28 25 28 30 30 37 33 33 28 28 28 37 37 47 39 39 39 31 31 28 28 28 43 37 48 48 37 37 28 24 28 30 32 36 34 34 37 31 31 32 27 34 35 37 37 39 39 46 46 48 48 43 59 41 30 30 30 30 34 34 39 48 48 48 43 44 48 48 43 39 39 35 35 39 39 41 34 36 43 44 44 21 27 14 18 16 27 41 48 57 57 57 48 57 57 59 59 59 57 57 57 59 59 48 59 59 48 43 57 54 54 54 57 57 54 54 54 48 46 43 46 44 44 36 36 48 57 57 59 57 57 57 57 57 57 57 59 68 68 59 59 68 68 68 68 68 68 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 59 68 68 68 68 68 68 59 59 57 57 57 57 57 57 59 59 59 68 68 68 57 57 57 57 57 57 59 57 57 52 57 57 57 57 68 57 59 68 68 59 59 59 59 68 68 59 59 59 59 59 68 59 59 57 57 57 59 59 68 59 59 59 59 59 57 57 57 59 59 52 57 59 59 59 68 59 59 57 57 57 57 57 57 57 57 59 57 62 68 68 68 68 62 62 62 62 62 68 68 68 68 62 62 62 62 68 68 68 68 62 62 59 59 59 59 59 57 57 57 52 52 57 57 57 57 57 57 57 57 59 59 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 57 57 52 52 52 44 44 52 59 43 50 43 52 52 57 59 57 57 57 57 57 54 54 52 57 52 52 52 57 59 59 57 57 59 57 57 57 59 54 54 54 57 57 48 48 37 44 40 44 44 44 42 44 43 46 46 57 57 57 57 59 59 57 54 42 42 42 42 35 39 39 48 57 57 57 37 37 30 44 32 35 32 44 37 43 43 43 43 43 42 48 48 46 46 47 47 43 43 43 47 59 59 57 57 43 43 43 37 37 32 32 39 43 43 43 37 41 23 23 23 24 29 31 26 25 13 13 13 25 25 25 21 11 18 11 18 18 37 28 24 18 13 12 19 22 26 30 28 30 34 28 24 28 32 23 18 18 28 26 28 24 19 19 19 21 21 17 24 22 28 22 19 13 10 11 11 18 32 37 37 37 37 32 27 25 27 37 34 30 19 19 15 26 26 13 8 8 8 8 8 10 14 14 14 26 26 26 28 12 12 11 11 11 16 16 12 14 9 11 10 14 15 16 11 10 10 10 10 15 17 20 18 12 25 10 10 10 10 10 11 12 12 12 16 22 24 28 14 14 11 16 9 9 8 15 8 8 8 13 15 22 10 10 8 8 9 9 9 9 9 10 10 15 15 10 10 11 11 9 8 8 8 10 15 16 12 11 9 9 9 10 13 11 13 10 10 10 10 9 9 9 10 9 12 10 12 10 16 10 9 9 9 10 10 10 10 11 11 9 15 11 8 9 9 10 11 13 11	Open. Hide. 6 8 8 8 7 6 8 8 8 8 8 8 8 6 6 6 6 6 6 6 6 15 13 13 8 8 8 8 8 8 10 10 11 10 11 12 12 8 6 6 6 6 6 9 8 8 8 8 10 10 10 9 9 10 10 8 6 8 6 6 6 6 10 9 8 8 8 8 8 8 8 8 8 8 10 15 13 7 7 6 8 8 8 8 8 8 6 6 8 6 8 8 8 8 8 8 8 8 8 11 13 15 10 8 10 8 6 6 6 6 8 8 10 9 9 10 10 10 10 10 9 8 8 6 6 8 8 10 10 8 10 10 10 8 6 6 6 8 8 8 8 6 6 8 8 9 11 11 12 11 11 8 8 8 8 8 8 13 12 12 8 10 10 10 11 8 8 6 6 6 8 8 8 8 8 8 6 8 10 8 8 8 8 8 8 8 8 8 10 8 8 8 10 9 12 10 9 7 7 8 8 8 6 6 6 6 8 8 10 9 8 6 8 6 6 8 8 8 8 8 8 8 8 8 10 8 10 12 13 13 10 9 8 8 8 10 10 8 11 9 10 10 8 8 9 8 10 8 9 8 8 8 8 8 8 8 9 9 8 10 8 6 8 6 7 13 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 8 6 7 8 8 8 8 11 11 10 10 13 10 9 9 9 8 8 6 6 6 6 8 8 8 6 8 8 8 8 8 8 8 11 11 11 10 9 9 9 8 8 6 6 6 8 8 8 8 10 8 8 8 6 6 8 6 10 8 8 8 8 6 6 6 6 8 8 8 8 8 10 10 10 8 8 7 7 8 8 8 8 8 8 8 6 6 6 6 8 8 8 10 10 10 10 8 8 8 6 6 6 6 8 8 8 8 8 6 6 6 6 8 6 6 8 8 8 8 8 8 6 8 6 6 8 8 8 8 8 8 8 8 7 8 6 6 8 8 9 9 8 8 8 8 8 8 8 8 6 6 10 10 10 10 10 8 8 7 7 7 8 10 11 9 9 8 8 8 8 8 8 8 8 10 10 10 7 7 8 8 8 8 8 8 8 10 10 10 6 6 6 6 8 8 6 6 6 6 6 6 6 8 8 8 8 8 8 6 6 6 6 6 6 6 8 8 11 11 11 8 8 8 8 8 8 8 8 6 6 6 9 10 10 13 16 11 8 8 10 8 8 8 10 10 9 9 8 8 8 8 8 8 8 8 8 10 12 12 11 10 8 8 6 6 8 12 8 8 8 8 8 10 10 13 10 8 8 8 8 6 6 6 8 10 10 8 8 8 8 10 10 10 8 8 8 11 11 8 8 8 8 7 8 11 11 10 8 8 6 6 8 8 11 13 10 8 8 8 8 8 8 9 11 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 6 6 8 8 9 9 9 8 8 8 8 8 8 8 8 8 9 9 9 9 8 10 8 8 10 8 8 9 10 9 9 9 9 9 6 6 6 6 8 8 6 6 8 8 14 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 8 6 6 8 7 9 10 8 8 8 10 10 12 11 11 6 8 7 6 8 8 8 8 8 8 10 11 10 8 8 6 6 8 6 8 8 8 8 10 12 11 11 11 11 8 8 8 8 8 8 8 8 12 8 8 7 7 8 8 9 8 8 8 8 8 8 8 8 8 11 10 10 8 8 8 8 8 8 8 9 12 13 10 8 8 9 9 9 10 8 8 10 10 8 8 6 6 6 8 8 8 8 8 8 6 6 8 8 10 8 8 8 8 8 8 8 8 8 7 6 8 8 9 9 9 9 9 9 9 10 8 8 8 8 8 6 8 8 9 10 8 8 8 8 8 10 8 8 8 6 6 8 8 9 9 9 9 8 8 8 8 8 8 8 8 8 10 8 8 9 10 10 12 10 10 8 8 8 8 8 12 11 11 15 10 10 10 8 8 8 8 8 8 10 8 8 8 9 9 7 8 6 6 8 6 6 8 7 6 10 8 8 9 9 8 8 6 6 6 8 8 8 8 8 8 8 6 6 6 8 8 8 8 8 8 8 8 8 8 9 8 8 8 8 8 7 6 8 8 8 8 8 8 8 8 8 8 10 16 19 16 16 9 9 7 8 8 6 6 6 8 8 9 10 10 10 10 10 10 10 9 11 8 8 7 7 12 8 8 8 8 8 8 9 9 11 15 11 8 8 8 8 8 8 8 8 6 8 6 6 8 8 11 8 8 8 6 6 6 8 10 8 8 8 8 8 8 8 10 8 8 8 8 9 10 10 10 10 10 10 8 8 8 8 8 8 11 11 9 9 9 6 8 6 6 6 6 6 6 6 8 8 12 13 8 8 6 6 8 8 8 6 8 8 8 8 9 10 8 9 9 9 8 8 8 8 8 6 10 10 9 9 9 9 8 8 8 8 8 8 13 11 11 11 11 9 11 9 8 8 8 8 9 8 9 11 10 15 9 9 9 8 8 8 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no447_d13.b1 MSMg01no447_d13.b1 CHROMAT_FILE:
MSMg01no447_d13.b1 PHD_FILE: MSMg01no447_d13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:02 2005
         (458 letters)



>mm_chr13_19852669_19853526
          Length = 858

 Score =  886 bits (458), Expect = 0.0
 Identities = 458/458 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcctctgaaaaatgacttcattttatcttcatttaaagatacactttaatggcatagcag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcctctgaaaaatgacttcattttatcttcatttaaagatacactttaatggcatagcag 260

                                                                       
Query: 61  catagaataaggctttcttccagcatggtaaagatgctgtgtcatcatactctagccttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catagaataaggctttcttccagcatggtaaagatgctgtgtcatcatactctagccttc 320

                                                                       
Query: 121 atcattggtacttaggccactgatgcagctgctgcatctgttaatgttgtacttcttttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcattggtacttaggccactgatgcagctgctgcatctgttaatgttgtacttcttttt 380

                                                                       
Query: 181 tcttaagctttatgtcaagtagatgattttctttgtgctgagcatagtcttgtgtctgtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttaagctttatgtcaagtagatgattttctttgtgctgagcatagtcttgtgtctgtg 440

                                                                       
Query: 241 ggtttttctctgattgttctgattgaaattcctcttgtttcttaagtgaactagttgatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtttttctctgattgttctgattgaaattcctcttgtttcttaagtgaactagttgatg 500

                                                                       
Query: 301 tcctttctaacctgaaggaaggcctcacctatgaccctagagacactgttttgttccaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcctttctaacctgaaggaaggcctcacctatgaccctagagacactgttttgttccaat 560

                                                                       
Query: 361 tcattctttcttctcacagttcaaatatacttatgctagacattttcagtgtttctctta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcattctttcttctcacagttcaaatatacttatgctagacattttcagtgtttctctta 620

                                                 
Query: 421 aagctctactttttccaactcttctcctatctgggtgt 458
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagctctactttttccaactcttctcctatctgggtgt 658


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space:   379904
Effective search space used:   379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information