Query= MSMg01no447_g17.b1 MSMg01no447_g17.b1 CHROMAT_FILE:
MSMg01no447_g17.b1 PHD_FILE: MSMg01no447_g17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:19 2005
(478 letters)
>mm_chr13_60278697_60279573
Length = 877
Score = 901 bits (466), Expect = 0.0
Identities = 475/478 (99%), Gaps = 1/478 (0%)
Strand = Plus / Minus
Query: 1 ccttcgctataccccccgaggtgatcagaactcagagatgaggagcctgaaaattaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ccttcgctataccccccgaggtgatcagaactcagagatgaggagcctgaaaattaaagt 618
Query: 61 gactttcgaactttctcggatgcaaagatgggggatcagtaagaattaataaaagtgtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gactttcgaactttctcggatgcaaagatgggggatcagtaagaattaataaaagtgtcc 558
Query: 121 ccccacccaaacaaaaagggggcggaggaagggaacaaaaaggccggtggctgagccgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ccccacccaaacaaaaagggggcggaggaagggaacaaaaaggccggtggctgagccgga 498
Query: 181 tgcaggcagctggccctaagccctgcccgctggctctgtgcgcgagctggggttcggtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgcaggcagctggccctaagccctgcccgctggctctgtgcgcgagctggggttcggtat 438
Query: 241 cccagcctcctgaattagtgggaggagctgggcctgtgtcaggctccctaagccgttcct 300
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cccagcctcctgaa-gagtgggaggagctgggcctgtgtcaggctccctaagccgttcct 379
Query: 301 ttcaagccctgaatgcctgaatgtgagctgcccaccgccctcccccactctgcagcccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttcaagccctgaatgcctgaatgtgagctgcccaccgccctcccccactctgcagcccca 319
Query: 361 ctccagcggctcggaaaaaaaaaaaaaagtttcaacaacaacaggctggaccaatagcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ctccagcggctcggaaaaaaaaaaaaaagtttcaacaacaacaggctggaccaatagcag 259
Query: 421 ctcgcaaagccggggaagggggccgagcaaaaggcgccggagagtggagaaaggagaa 478
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 258 ctcgcaaagccggggaagggggccgagcaaagggcgccggagagtggagaaaggagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 877
Length adjustment: 10
Effective length of query: 468
Effective length of database: 867
Effective search space: 405756
Effective search space used: 405756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_g17.g1 MSMg01no447_g17.g1 CHROMAT_FILE:
MSMg01no447_g17.g1 PHD_FILE: MSMg01no447_g17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:19 2005
(444 letters)
>mm_chr13_60094291_60095134
Length = 844
Score = 851 bits (440), Expect = 0.0
Identities = 443/444 (99%)
Strand = Plus / Plus
Query: 1 tgcagtgcccaattactgacctcaggagtcagcattctggagattagagtcacggggcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcagtgcccaattactgacctcaggagtcagcattctggagattagagtcacggggcgg 260
Query: 61 gcgttcgcttcacaggctcacttctaataatataccttccatgcggacaccattaacctg 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcgttcacttcacaggctcacttctaataatataccttccatgcggacaccattaacctg 320
Query: 121 ccttttccagttagccaataacgctgggctcaaggcaaaattgttatcagctctccaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttttccagttagccaataacgctgggctcaaggcaaaattgttatcagctctccaggg 380
Query: 181 gtcaggcccctgctttaattagaaacaggggcatctgcaagggaaagtaatgagagtgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcaggcccctgctttaattagaaacaggggcatctgcaagggaaagtaatgagagtgga 440
Query: 241 cagcacagggaggcgaggtgagaagtcactgggtcttgggacttgcaggaacaatgtctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagcacagggaggcgaggtgagaagtcactgggtcttgggacttgcaggaacaatgtctc 500
Query: 301 ttgggactgaaagagtcaccagcattcagcctatcccgaggctaaactttcattttcctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgggactgaaagagtcaccagcattcagcctatcccgaggctaaactttcattttcctg 560
Query: 361 gtcagtttattcctgaaatgagcaagtggtattgatcatgctacttgtaccacgtattcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtcagtttattcctgaaatgagcaagtggtattgatcatgctacttgtaccacgtattcc 620
Query: 421 ctggtatgccactcagctttctgt 444
||||||||||||||||||||||||
Sbjct: 621 ctggtatgccactcagctttctgt 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
