Query= MSMg01no447_i24.b1 MSMg01no447_i24.b1 CHROMAT_FILE:
MSMg01no447_i24.b1 PHD_FILE: MSMg01no447_i24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:30 2005
(459 letters)
>mm_chr13_63535831_63536689
Length = 859
Score = 832 bits (430), Expect = 0.0
Identities = 448/460 (97%), Gaps = 12/460 (2%)
Strand = Plus / Minus
Query: 1 gtagtttagtggtacaacacttgtctagtatgaacggcagcttggtttaatccccagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gtagtttagtggtacaacacttgtctagtatgaacggcagcttggtttaatccccagcac 661
Query: 61 cctgatttattctgatttattctttattggctgtgtacaaactgggagcattgctttact 120
| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 c----------ctgatttattctttattggctgtgtacaaactgggagcattgctttact 611
Query: 121 tacaggtactggaattatga-atcaagtgagacagtgaccatagagtgcctggggaagtt 179
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tacaggtactggaatta-gagatcaagtgagacagtgaccatagagtgcctggggaagtt 552
Query: 180 ccccaaacagagatgctcactaaacgctgcagaacagagatgctcattaaacactgattt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ccccaaacagagatgctcactaaacgctgcagaacagagatgctcattaaacactgattt 492
Query: 240 ttttgaggccttactgtgtttcccaggcaacctttatgcttcaggctcatgagtagtggg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttttgaggccttactgtgtttcccaggcaacctttatgcttcaggctcatgagtagtggg 432
Query: 300 atcatagccactatgactgttttacatgttggtttctcatgcttgcgtgttatggcttga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 atcatagccactatgactgttttacatgttggtttctcatgcttgcgtgttatggcttga 372
Query: 360 ctatgaaatatctcacagaggctcaagtgttgaatgtttgggtcacagctggcagttcta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ctatgaaatatctcacagaggctcaagtgttgaatgtttgggtcacagctggcagttcta 312
Query: 420 ctttgaaaggcagtcaaaactttgagggaggtgaagcctg 459
||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctttgaaaggcagtcaaaactttgagggaggtgaagcctg 272
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_i24.g1 MSMg01no447_i24.g1 CHROMAT_FILE:
MSMg01no447_i24.g1 PHD_FILE: MSMg01no447_i24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:30 2005
(418 letters)
>mm_chr13_63355851_63356668
Length = 818
Score = 808 bits (418), Expect = 0.0
Identities = 418/418 (100%)
Strand = Plus / Plus
Query: 1 actggggttctgatgggaattccactggctcctccaaggggactttagtggaagccacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actggggttctgatgggaattccactggctcctccaaggggactttagtggaagccacta 260
Query: 61 gagctgttttactgttttggggtgaggtctcaagtaagctcagcttgcaaggtctagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagctgttttactgttttggggtgaggtctcaagtaagctcagcttgcaaggtctagcag 320
Query: 121 ctcacagtgtagtacctactgctgttctgagcacagagaagctagtgcagccttcaagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcacagtgtagtacctactgctgttctgagcacagagaagctagtgcagccttcaagac 380
Query: 181 aagtgatgtgctctccaccccaactgtggttctcaggaagaattcacttcgagtagttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtgatgtgctctccaccccaactgtggttctcaggaagaattcacttcgagtagttaa 440
Query: 241 tatgtttccctaagctcagacttactaagagaagcccacttagatgctaaagaaatgggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatgtttccctaagctcagacttactaagagaagcccacttagatgctaaagaaatgggc 500
Query: 301 tgtgtatgtctcagctatgagtaatgggctatgcatgattaaaaaggcttctcagaatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgtatgtctcagctatgagtaatgggctatgcatgattaaaaaggcttctcagaatgg 560
Query: 361 ccttgcttatgtaattgaggatcgatacattttagaagggttttataggtgagccaca 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccttgcttatgtaattgaggatcgatacattttagaagggttttataggtgagccaca 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
