Query= MSMg01no448_p02.b1 MSMg01no448_p02.b1 CHROMAT_FILE:
MSMg01no448_p02.b1 PHD_FILE: MSMg01no448_p02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:23 2005
(380 letters)
>mm_chr13_41654281_41655057
Length = 777
Score = 683 bits (353), Expect = 0.0
Identities = 367/373 (98%), Gaps = 3/373 (0%)
Strand = Plus / Plus
Query: 5 gaattccacctgccttgttcaatgcttggatgtaattgatctcaaaccaaatgactctaa 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacctgccttgggaaatgcttggatgtaattgatctcaaaccaaatgactctaa 264
Query: 65 ggttagaggatggttaactaaaatctaatttatatgagtgttaaacgcacactgtgtcag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggttagaggatggttaactaaaatctaatttatatgagtgttaaacgcacactgtgtcag 324
Query: 125 aaatagacctgaacaggtctgcatgtgcgtttttctataatgtcaggactctgtgaatga 184
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 325 aaatagacctgaacaggtctgcatgtgcgtttttctat---gtcaggactctgtgaatga 381
Query: 185 caataaattcacaagttgcaaaggggtttggttccagcagcagcgatttgccagacactg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 caataaattcacaagttgcaaaggggtttggttccagcagcagcgatttgccagacactg 441
Query: 245 tccctttcctagaccaccctggcccaggcaaacacagcttctttgatttcaaactaatat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tccctttcctagaccaccctggcccaggcaaacacagcttctttgatttcaaactaatat 501
Query: 305 taactctcagctcccacatcacacagaaaaaccttctatctttatctgtgcatatatgta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 taactctcagctcccacatcacacagaaaaaccttctatctttatctgtgcatatatgta 561
Query: 365 ggttacagaatgt 377
|||||||||||||
Sbjct: 562 ggttacagaatgt 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 777
Length adjustment: 9
Effective length of query: 371
Effective length of database: 768
Effective search space: 284928
Effective search space used: 284928
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_p02.g1 MSMg01no448_p02.g1 CHROMAT_FILE:
MSMg01no448_p02.g1 PHD_FILE: MSMg01no448_p02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:23 2005
(318 letters)
>mm_chr13_41831180_41831897
Length = 718
Score = 592 bits (306), Expect = e-173
Identities = 315/318 (99%)
Strand = Plus / Minus
Query: 1 caggcagcaatgtcacgagcctggaaggtacatcctgacatatgttaaataagtgaggtt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 518 caggcagcaatgtcacgagcctggaaggtacatcctgacatatgttaagtaagtgaggtt 459
Query: 61 catggtataaatgactgtccccccagggagggggagctttaaaatgaaaccaataatgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 catggtataaatgactgtccccccagggagggggagctttaaaatgaaaccaataatgta 399
Query: 121 tccttcactagagaagactacatgctcttgcccctatccataatgagagtcctgactctg 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 398 tccttcactagagaagactacatgctcttgcccctatccataatgagagacctgactctg 339
Query: 181 atcatagcttaggaactcactaagtgaggatgtggcaaagacaagatcctcgtgcgcttt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 338 atcatagcttaggaactcactaagtgaggatgtggcaaagacaagatcctcgtgtgcttt 279
Query: 241 gtaagaggggctgaagttaagctgtgcccttatgcttctaaattgcctttgtgagtaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gtaagaggggctgaagttaagctgtgcccttatgcttctaaattgcctttgtgagtaggg 219
Query: 301 atgggatggcagtggaat 318
||||||||||||||||||
Sbjct: 218 atgggatggcagtggaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
