Query= MSMg01no451_e10.b1 MSMg01no451_e10.b1 CHROMAT_FILE:
MSMg01no451_e10.b1 PHD_FILE: MSMg01no451_e10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:28 2005
(454 letters)
>mm_chr13_56641753_56642609
Length = 857
Score = 665 bits (344), Expect = 0.0
Identities = 358/364 (98%), Gaps = 3/364 (0%)
Strand = Plus / Minus
Query: 1 aagttgagctcagcttgccagctaagcaacattccagaacggtgcttaggaggcaaagca 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 364 aagttgagctcagcttgccagctaagcaacattccggaacggtgcttaggaggcaaagca 305
Query: 61 cagttatacatggaaaccaagctgattccccagaataggga---agaatgcccacagagc 117
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 304 cagttatacatggaaaccaagctgattccccagaatagggaaggagaatgcccacagagc 245
Query: 118 agagcaggagatctgccttcgcctgccattcacacccttttgatagaaatggatccaagg 177
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 agagcaggagatctgcctttgcctgccattcacacccttttgatagaaatggatccaagg 185
Query: 178 agctgaaggagtttacagccccataggaggaacaacagtatgaactaaccagtacccaca 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 agctgaaggagtttacagccccataggaggaacaacagtatgaactaaccagtacccaca 125
Query: 238 gaactcccagggactaaaccactaatcaaagagaacacaaggaggtactcaaggcttcat 297
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 124 gaactcccagggactaaaccactaatcaaagagaacacaaggagggactcaaggcttcat 65
Query: 298 tcagccccatatgtagcagaggatggccttgtgcgacatcagtgagaggagaggcccttg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tcagccccatatgtagcagaggatggccttgtgcgacatcagtgagaggagaggcccttg 5
Query: 358 gtct 361
||||
Sbjct: 4 gtct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 857
Length adjustment: 10
Effective length of query: 444
Effective length of database: 847
Effective search space: 376068
Effective search space used: 376068
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_e10.g1 MSMg01no451_e10.g1 CHROMAT_FILE:
MSMg01no451_e10.g1 PHD_FILE: MSMg01no451_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:28 2005
(637 letters)
>mm_chr13_56477992_56479028
Length = 1037
Score = 1191 bits (616), Expect = 0.0
Identities = 631/636 (99%)
Strand = Plus / Plus
Query: 1 tacaaatgtggcatccccaacaccctgcccctgaccaatgatgaacactcgttccatagc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tacaaatgtggcatccccaacaccctgcccctgaccaatgatgaacactcattccatagc 260
Query: 61 ccttacgcaccccaaaggtgcctttgttccccaaattctcacctcacaatccttcccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttacgcaccccaaaggtgcctttgttccccaaattctcacctcacaatccttcccagg 320
Query: 121 caatcacactgtttcaggttgagagcagagtataaagttcaatggctgaatggaaggagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caatcacactgtttcaggttgagagcagagtataaagttcaatggctgaatggaaggagg 380
Query: 181 cagagccagtctggtcacagagtggttgtggctgctcccaagagcagacatcctttttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagagccagtctggtcacagagtggttgtggctgctcccaagagcagacatcctttttga 440
Query: 241 gtggcccaaggaatccccacacttccaatactgtttgcatccctggcattgatgtcaggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtggcccaaggaatccccacacttccaatactgtttgcatccctggcattgatgtcaggt 500
Query: 301 ctccatgggcctagccaggcctgtcaataacacatattattattgactgagtgagaatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctccatgggcctagccaggcctgtcaataacacatattattattgactgagtgagaatgg 560
Query: 361 agaaagctctgtgtggggtcagctctggccaagggatggagtgcaaagagggcggggtct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaaagctctgtgtggggtcagctctggccaagggatggagtgcaaagagggcggggtct 620
Query: 421 aaagatctatgaacaagacaaaatctagtaactaaagacttaagctttgtaaaggctttt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaagatctatgaacaagacaaaatctagtaactaaagacttaagctttgtaaaggctttc 680
Query: 481 gacatgtggtcaggaccggaattggcgttcactggcccactgaccccccaagtctgagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gacatgtggtcaggaccggaattggcgttcactggcccactgaccccccaagtctgagaa 740
Query: 541 gctgggaagtgcctccacactctgcctcgccttgggccaactggcatgcttgatgactga 600
||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||
Sbjct: 741 gctgggaagtgcctccacattttacctcgccttgggccaactggcatgcttgatgactga 800
Query: 601 gaagttttgagaaatcccctgcttggaacattgcag 636
||||||||||||||||||||||||||||||||||||
Sbjct: 801 gaagttttgagaaatcccctgcttggaacattgcag 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
