AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACGTTCATGAATGGTGTATTTTGCTTAATGTCTGGCATAGTTTGGA
ATTTGGTTTCCCTGTGCTTCTGTCACATGCCCACCCTTTTTCCTTTTGCT
GTTATGTTATTCATGGCGCATTATGTGGTCCTCATCAGGGTAGAACAGAT
GTGACTTCCCAAACTTCCTGTCTCTAAAACTATGAACTAAAAAACATTTT
AAGTTACATAGCCTCAGGTGCACTATATTGCATAATGCATCCTAAAACTA
CATTATATTAGTTCCTGATTTTTTTTGGTTAAATAACTAATCAATGATTT
TAAAAATTGTATCCATTTGAAGTGATATTCATCTAATCTGAACTTAGTTT
TATTAGATGGAGACTTTTATTCGATGGAGTGGCTGTTGAAAAGTCATCAT
TTCCTGAGTATGGAAGTCAGGGTGGTTGTTCATTCATTTCAGCTGTTTGT
TGTAGAAGACTTGACAAGACCACAGTTGTGCTTTACCTATTTTTTTGTAT
GGACATTTGATAGCTTCTCCAGCAACATAGACTGTGTTCATGGGAACTGT
GATTAAGCCACAAACTTCCTGTCCCTCTCTGCTACATCTGCAGTAATCAG
TTGACATGCCTCAAGTTCCTAACCAATATCATCAGTTTGCAAGTGCTTTG
ATGGCAGGCATGACAAGCCTCATATTGGCATGCATTGCTCAAGAAATATT
TGTCAAGTGTTGGAGAN

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCAAATGGCAGA
GAAGCACCTGAAAAAATGTTCAGCATCCTTAATCATCAGGGAAATGCAAA
TCAAAACAACACTGAGATTCCATCTCACATCAGTCAAAATGGCTAAGATA
AAAAATTCAGGTGACAGCAGATGCTGGCAAGGATGTGGAGAAAGGAACAC
TCCTCCATTATTGGTGGGATTGCAAACTTGTACAACCTCTCTGGAAATCA
GTCTGGCGGTTCCTCAAAAAGTGGACATAGTACTATCAGAGGATCCAGCC
ATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACGGGTAAGAAGGA
CACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAACT
GGAAAGAACCCAGATGTCCCTCAACAGAGAAATGGATACAGAAAATGTGG
AACATTTAAACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTAT
GAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGACTGAGG
TAACACAATCACAATAGAACTCACATGATATGTACTCACTAATAAGTGGA
TATTAGCCCAAAAATTTAGAATACCCAAGATATAAGATACAATTTGCAAA
ACACATGAAAGTCAAGAAAAAGGAAGCCCAAAGTGTGGACACTTTGCCCG
CTCTTAGAATTGGGAACAAAACACCCATG

Query= MSMg01no451_e17.b1 MSMg01no451_e17.b1 CHROMAT_FILE:
MSMg01no451_e17.b1 PHD_FILE: MSMg01no451_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:29 2005
         (723 letters)



>mm_chr13_78852072_78853194
          Length = 1123

 Score = 1342 bits (694), Expect = 0.0
 Identities = 712/718 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacgttcatgaatggtgtattttgcttaatgtctggcatagtttggaatttggtt 64
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacgttcaggaatggtgtattttgcttaatgtctggcatagtttggaatttggtt 264

                                                                       
Query: 65  tccctgtgcttctgtcacatgcccaccctttttccttttgctgttatgttattcatggcg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tccctgtgcttctgtcacatgcccaccctttttccttttgctgttatgttattcatggcg 324

                                                                       
Query: 125 cattatgtggtcctcatcagggtagaacagatgtgacttcccaaacttcctgtctctaaa 184
           | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgttatgtgatcctcatcagggtagaacagatgtgacttcccaaacttcctgtctctaaa 384

                                                                       
Query: 185 actatgaactaaaaaacattttaagttacatagcctcaggtgcactatattgcataatgc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actatgaactaaaaaacattttaagttacatagcctcaggtgcactatattgcataatgc 444

                                                                       
Query: 245 atcctaaaactacattatattagttcctgattttttttggttaaataactaatcaatgat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atcctaaaactacattatattagttcctgattttttttggttaaataactaatcaatgat 504

                                                                       
Query: 305 tttaaaaattgtatccatttgaagtgatattcatctaatctgaacttagttttattagat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tttaaaaattgtatccatttgaagtgatattcatctaatctgaacttagttttattagat 564

                                                                       
Query: 365 ggagacttttattcgatggagtggctgttgaaaagtcatcatttcctgagtatggaagtc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggagacttttattcgatggagtggctgttgaaaagtcatcatttcctgagtatggaagtc 624

                                                                       
Query: 425 agggtggttgttcattcatttcagctgtttgttgtagaagacttgacaagaccacagttg 484
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 625 agggtggttgttcattcatttcggctgtttgttgtagaagacttgacaagaccacagttg 684

                                                                       
Query: 485 tgctttacctatttttttgtatggacatttgatagcttctccagcaacatagactgtgtt 544
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgctttacctatttttttgtatagacatttgatagcttctccagcaacatagactgtgtt 744

                                                                       
Query: 545 catgggaactgtgattaagccacaaacttcctgtccctctctgctacatctgcagtaatc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 catgggaactgtgattaagccacaaacttcctgtccctctctgctacatctgcagtaatc 804

                                                                       
Query: 605 agttgacatgcctcaagttcctaaccaatatcatcagtttgcaagtgctttgatggcagg 664
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 agttgacatgcctcaggttcctaaccaatatcatcagtttgcaagtgctttgatggcagg 864

                                                                     
Query: 665 catgacaagcctcatattggcatgcattgctcaagaaatatttgtcaagtgttggaga 722
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 catgacaagcctcatattggcatgcattgctcaagaaatatttgtcaagtgttggaga 922


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 723
Length of database: 1123
Length adjustment: 10
Effective length of query: 713
Effective length of database: 1113
Effective search space:   793569
Effective search space used:   793569
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)