AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCTCCTTTGCTTTTCATCTTTTATAGAGTGTAATCTGCAGTATATA
GGTCTTTTAGATGGGCTTATTTCACTCAGTCATATGAATTTCATTTCCTG
AGTGCAGAATAATATTACATGATTCAGACATACCACAGTTTATTTATCCA
TTTACTTAATGGCAGACATCTTGGTAGCTTCCGAGGTATGGCAGTTGTGA
ATAAAGCTCCGATAATCACCTTCTCTGCTGGTGATGCCTCTCACTCCCCA
CCCTGCCCATCACGGGGGCCGGCATTGCATTCTAATCTCTGTCTACCCTC
GCGCTCCTTGTCTTCTGCCCCAGGTTAGTTCTGAAAGTCAGAGGCATTCA
GAGGCAAGAGGTTCCTGCTCTCAGATGGCAGAGCAAACCTATAAGCACAT
CTAATGCCTTGGGCCAGAGGGGATGGCACCTTTGGAGGTTAGGCCCAAGG
GTCACTGCTTCCTCGGCTCTAGGGAAGCTTGGCACGACCAAATTCATACC
TAAAGGAGAAGTAGGTGCCAGGGTGGCCAAGTAGGGAACTTCTCAAAACA
ATGAGTGTCGGATGGACTCTTCCTGGAGTGGTGCAGATGGCAGACAGGAT
ATGAGTAGCAAATGAGATGCTCAAACGCAGGGCGGAGTGGTGCACACCTT
TAACCTCAGCACTCAGGAGGCAAAAGCAAGTGGATCTCTGTGAGTCTGAG
GCCAACCTGGTCTAAAAGAGTTCTGGN

CATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTCTTGGAAGATTTTACCTTTGATGAGTA
TGAAGTGCCCCTCCTTGTCTTTTTTGATGACTTTGGGTTGGAAGTCGATT
TTATTAGATATTTGAATGGCTACTCCAGCCTGTTTCTTCAGACCATTTGT
TTGGAAAATTGTTTTCCAGCCTTTCATTGTGAGGCAGTGTCTATCTTTTC
CCTGAGATGAGTTTCCTGTAAGCAGCAAAATGTTGGGTCCTGTTTTTGTA
GCCAGTCTGCTAGTCTATGCCTTTTTATTGGGGAGTTGAGTTCATTGATA
TTAAGAGATATTAAGGAAAAGTAATTGTTGCTTCCTGTTATTTTTGTTGT
TAAAGTTGGCATTCTGTTCTTGTGGCTGTCTTGTTTTAGGTTTGTTGAGG
GATTACCTTCTTGCTTCTTCTAGGACATGGTTTCTGTCCTTGTATTGGTT
TTTTTTTCTGTTATTATCCTTTGAAGGGCTGGATTCATAGAAAGATAGTG
TGCAAACTTGGTTCTGTCGTGGAATACCTTCGTTTCTTTATCTAGGGTAA
TTGAAAGTTTGGCTGGGTATAGTAGCTTGGGCTGGCATTTGTGTTCTCTT
AGTGTCTGTATAACATCTGTCCAGGCTCTTCTGGCTTCCATAGTCTCTTG
TGAAAAATCTGGTGTAATTCTGATAGGCTTGCCTTTATATGTTACTGGAC
CTTTCTCCCTTATTGCTTTTAATTTCN

Query= MSMg01no451_m20.b1 MSMg01no451_m20.b1 CHROMAT_FILE:
MSMg01no451_m20.b1 PHD_FILE: MSMg01no451_m20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:11 2005
         (660 letters)



>mm_chr13_36651355_36652414
          Length = 1060

 Score = 1183 bits (612), Expect = 0.0
 Identities = 645/656 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctcctttgcttttcatcttttatagagtgtaatctgcagtatataggtctttt 64
           |||||||||||   ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 205 gaattctctccaaggcttttcatcttttatagagtgtaatctgcagtatgtaggtctttt 264

                                                                       
Query: 65  agatgggcttatttcactcagtcatatgaatttcatttcctgagtgcagaataatattac 124
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agatgggcttatttcacttagtcatatgaatttcatttcctgagtgcagaataatattac 324

                                                                       
Query: 125 atgattcagacataccacagtttatttatccatttacttaatggcagacatcttggtagc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgattcagacataccacagtttatttatccatttacttaatggcagacatcttggtagc 384

                                                                       
Query: 185 ttccgaggtatggcagttgtgaataaagctccgataatcaccttctctgctggtgatgcc 244
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttccgaggtgtggcagttgtgaataaagctccgataatcaccttctctgctggtgatgcc 444

                                                                       
Query: 245 tctcactccccaccctgcccatcacgggggccggcattgcattctaatctctgtctaccc 304
           |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 445 tctcactccccaccctgcccgtcacgggggccgacattgcattctaatctctgtctaccc 504

                                                                       
Query: 305 tcgcgctccttgtcttctgccccaggttagttctgaaagtcagaggcattcagaggcaag 364
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgcgctccttgtcttctgccccaggttagttctgaaagtcagaggcattcagaggcaag 564

                                                                       
Query: 365 aggttcctgctctcagatggcagagcaaacctataagcacatctaatgccttgggccaga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aggttcctgctctcagatggcagagcaaacctataagcacatctaatgccttgggccaga 624

                                                                       
Query: 425 ggggatggcacctttggaggttaggcccaagggtcactgcttcctcggctctagggaagc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggggatggcacctttggaggttaggcccaagggtcactgcttcctcggctctagggaagc 684

                                                                       
Query: 485 ttggcacgaccaaattcatacctaaaggagaagtaggtgccagggtggccaagtagggaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttggcacgaccaaattcatacctaaaggagaagtaggtgccagggtggccaagtagggaa 744

                                                                       
Query: 545 cttctcaaaacaatgagtgtcggatggactcttcctggagtggtgcagatggcagacagg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cttctcaaaacaatgagtgtcggatggactcttcctggagtggtgcagatggcagacagg 804

                                                                   
Query: 605 atatgagtagcaaatgagatgctcaaacgcagggcggagtggtgcacacctttaac 660
           |||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 805 atatgagtagcaaatgagatgctcaaacgcagggtgtagtggtgcacacctttaac 860


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space:   682500
Effective search space used:   682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)