Query= MSMg01no452_i22.b1 MSMg01no452_i22.b1 CHROMAT_FILE:
MSMg01no452_i22.b1 PHD_FILE: MSMg01no452_i22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:09 2005
(693 letters)
>mm_chr13_8383273_8384365
Length = 1093
Score = 1222 bits (632), Expect = 0.0
Identities = 674/688 (97%)
Strand = Plus / Plus
Query: 6 gaattctttgtctttgctgatttaggtatggaaccccaatatttgtaataagaatcacat 65
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 206 gaattctttgtctaagctgatttaggtatggaaccccaatatttgtaataagaatcgcac 265
Query: 66 acccacctgttcccacaaaagagaggcaagaattctaagaagcccttgatccctagctga 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 acccacctgttcccacaaaagagaggcaagaattctaagaagcccttgatccctagctga 325
Query: 126 aaacaaaacaaaactagagtttgcattactttttactgttttcctttttagccctccatt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aaacaaaacaaaactagagtttgcattactttttactgttttcctttttagccctccatt 385
Query: 186 atttcctgcctcaagatgaaaagctctgtcaaatcaagagacaatcttataaattgtctt 245
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 386 atttcctgcctcaagatgaaaagccctgtcaaatcaagagacaatcttataaattgtctt 445
Query: 246 taaattcctaagagcatttagagtcaattcaaagcagaatataaagaactggaagggccc 305
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 446 taagttcctaagagcatttagagtcaattcaaggcagaatataaagaactggaagggccc 505
Query: 306 tttgttctcctggttttgtttccatcccttctactatccacactcccaaatctccctgat 365
|||| ||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 506 tttgctcttctgattttgtttccatcccttctactatccatactcccaaatctccctgat 565
Query: 366 atcaaaccaccccactccaggttctctttccgtttcctgtcaaatctggatgggaatcca 425
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 566 atcaaaccaccccactccaggttctctttccatttcctgtcaaatctggatggggatcca 625
Query: 426 ttagccagcatttatatttccggatgacactagtatagctgagtgttttcttatctccag 485
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 626 ttagccagcatttatatttccggatgacactagtgtagctgagtgttttcttatctccag 685
Query: 486 aagaatttgggtttctgacaggtcaatagcagaagaaaagccatctggatcccaggcccc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 aagaatttgggtttctgacaggtcaatagcagaagaaaagccatctggatcccaggcccc 745
Query: 546 agtcctcccatgttgtaaactgtcttctctgaggaagaatcctgggagatgttttgacct 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 agtcctcccatgttgtaaactgtcttctctgaggaagaatcctgggagatgttttgacct 805
Query: 606 tgtgacatattagtattttcagaacactgatatattgtaaggaacagtttcaaaaataaa 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 tgtgacatattagtattttcagaacactgatatattgtaaggaacagtttcaaaaataaa 865
Query: 666 caactacctatatgcacatacgtggatg 693
||||||||||||||||||||||||||||
Sbjct: 866 caactacctatatgcacatacgtggatg 893
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space: 739689
Effective search space used: 739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_i22.g1 MSMg01no452_i22.g1 CHROMAT_FILE:
MSMg01no452_i22.g1 PHD_FILE: MSMg01no452_i22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:09 2005
(614 letters)
>mm_chr13_8554430_8555442
Length = 1013
Score = 857 bits (443), Expect = 0.0
Identities = 449/451 (99%), Gaps = 1/451 (0%)
Strand = Plus / Minus
Query: 1 caggctcccttgggctacagagtgagaccaggcctaaaaaaaatccaaaaccaaaacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 caggctcccttgggctacagagtgagaccaggcctaaaaaaaatccaaaaccaaaacaaa 391
Query: 61 gaccaaatcaaccaaccaaacacataagaactaataccctattgtattttttacaataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gaccaaatcaaccaaccaaacacataagaactaataccctattgtattttttacaataca 331
Query: 121 aaataaagcataaaaaaaaacccagaaaaaatatgagtagctaattaaaaagacaaggga 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 aaataaagcat-aaaaaaaacccagaaaaaatatgagtagctaattaaaaagacaaggga 272
Query: 181 agagcaggtgccatatgggataaattggaaggaaatcagcagtttgcttcaaacacattg 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 271 agagcaggtgccatatgggataaattggaaggaaatcggcagtttgcttcaaacacattg 212
Query: 241 gagatgagtgtgtatggacagatataccatgaaggtataatcacaaggaagggtgatgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gagatgagtgtgtatggacagatataccatgaaggtataatcacaaggaagggtgatgac 152
Query: 301 tgaattaacaacagatatcgtaagtcttgagattcaggaaattcccatgaattaaaaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 tgaattaacaacagatatcgtaagtcttgagattcaggaaattcccatgaattaaaaagt 92
Query: 361 catgaaatcacaataaaccattaaaaggacatccttgagagtgcattcacttagagtttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 catgaaatcacaataaaccattaaaaggacatccttgagagtgcattcacttagagtttc 32
Query: 421 aagcagcatgaatcaaaaactagcaaacgta 451
|||||||||||||||||||||||||||||||
Sbjct: 31 aagcagcatgaatcaaaaactagcaaacgta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1013
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1003
Effective search space: 605812
Effective search space used: 605812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
