CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCCCAATTATTAATTGAAAGTTATATGCTTAATGTGTTAGATCAGT
GGGCTAGAATTAGTCATTTACATCTCGATCTATCACTGAAGCTGACCAGT
GACCTGAGACAAGTTATTAACATTCTTTATATTCCAATTTTCTCACCATA
TTCTCCCAGCATGGAAGATTGTTTACAAAATGCACCAAGTTCTAGGGGGA
AAGAGGCCTTATTACAACAGTGCCATGCTGTACGTCTGCTTGGTGTAACG
CGTTTCAATTATATCATTGATACTGTTTAGAATTTCTCAACTTAAGGACA
TTTTTGATCAAACAGGATTCTGAGTGGCTTTCCTGGGAGATGGTCTTTGA
AAGTGTGGCAACTCTTTCAAATATCAGTTTAGTATCTGTCCACCAAGGGA
GTGTGAAAAGTATATACTATTCAGGGATATCATTCCTGTTTCCTTGCTCA
ATATGATATCTGGAATATATTGAAGATGCGTTGGCCTCACCTATTTATAA
AGGGCTGGAACGGTTTAGATGGGCGCCATCCCGGGGCCAGTGATGCGTTT
TCTGTGGAGTCCTCTGAACAGGCTTTTCTGAAAAGAATACATTAGGTCTG
TCAGAATGATTCTTTTCAGGGGATGACGCCTTGCAGATGCCCTTTGTTGA
GGGAGAACGGATTAGCCTGCAAGGCTTTTCTGATCTTCAGGAAGACAGAA
NATTTCAAACATTCTT

CAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTAATTTTATTGTCCTATTTGTTGT
GATCTTCAGTGTGCCTAACTACAGACGGGCTGACCACATGCACACGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTNTNTNTNTNTACCACTTATCATGCACTATAATACTTTCATGCAAG
TGTTCTTGACTCCATGGATAAGGATCCAAGAGTACACTGGGACTTTAAAA
TGTGATTTCTGCATATCAGACACTATCTAATATTTATAAGGCTTGGGTGG
AACAGATAGATCCCTTTCACACAGAACTTCCTTTATTCCTTATCCCAGTG
CCACACCTGTAATCCCACCACCTAATATGCTGAGGTACAACTGCAAGTTC
AAGGCCAACCTAGGCTACCTCACCAGACCTCCTCTAATATTAAAAAAAAA
TATAACAGGAAAAGAGGTGAAAACTGACTGTGGTTATATGTTTATACCAA
TGTATTCCGGCTAGTTCTGAATCACACTGTATGTGCATTTTTGACATCAT
TTTGCCACACTAAACATGCGTTGTAAATCCTTGAATCTTATATGCTGTTA
ATAATCCTATAATTGTTATTTCTCTTTTCTGTGACACTTCCTGGAAAAGT
GTTTACTGCACTCCTCAGATTTTCCAAACTTTTTTTATCTTGCTTCATAT
AAATTATGTTACACTTTTTCCCTTGAG

Query= MSMg01no453_a20.b1 MSMg01no453_a20.b1 CHROMAT_FILE:
MSMg01no453_a20.b1 PHD_FILE: MSMg01no453_a20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:47 2005
         (698 letters)



>mm_chr13_28874462_28875559
          Length = 1098

 Score = 1326 bits (686), Expect = 0.0
 Identities = 692/694 (99%)
 Strand = Plus / Minus

                                                                        
Query: 5    gaattctcccaattattaattgaaagttatatgcttaatgtgttagatcagtgggctaga 64
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 gaattctcccaattattaattgaaagttatatgcttaatgtgttagatcagtgggctaga 988

                                                                        
Query: 65   attagtcatttacatctcgatctatcactgaagctgaccagtgacctgagacaagttatt 124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987  attagtcatttacatctcgatctatcactgaagctgaccagtgacctgagacaagttatt 928

                                                                        
Query: 125  aacattctttatattccaattttctcaccatattctcccagcatggaagattgtttacaa 184
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 927  aacattctttatattccaattttctcaccatattctcccagcatgggagattgtttacaa 868

                                                                        
Query: 185  aatgcaccaagttctagggggaaagaggccttattacaacagtgccatgctgtacgtctg 244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867  aatgcaccaagttctagggggaaagaggccttattacaacagtgccatgctgtacgtctg 808

                                                                        
Query: 245  cttggtgtaacgcgtttcaattatatcattgatactgtttagaatttctcaacttaagga 304
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807  cttggtgtaacgcgtttcaattatatcattgatactgtttagaatttctcaacttaagga 748

                                                                        
Query: 305  catttttgatcaaacaggattctgagtggctttcctgggagatggtctttgaaagtgtgg 364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747  catttttgatcaaacaggattctgagtggctttcctgggagatggtctttgaaagtgtgg 688

                                                                        
Query: 365  caactctttcaaatatcagtttagtatctgtccaccaagggagtgtgaaaagtatatact 424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687  caactctttcaaatatcagtttagtatctgtccaccaagggagtgtgaaaagtatatact 628

                                                                        
Query: 425  attcagggatatcattcctgtttccttgctcaatatgatatctggaatatattgaagatg 484
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627  attcagggatatcattcctgtttccttgctcaatatgatatctggaatatattgaagatg 568

                                                                        
Query: 485  cgttggcctcacctatttataaagggctggaacggtttagatgggcgccatcccggggcc 544
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567  cgttggcctcacctatttataaagggctggaacggtttagatgggcgccatcccggggcc 508

                                                                        
Query: 545  agtgatgcgttttctgtggagtcctctgaacaggcttttctgaaaagaatacattaggtc 604
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507  agtgatgcggtttctgtggagtcctctgaacaggcttttctgaaaagaatacattaggtc 448

                                                                        
Query: 605  tgtcagaatgattcttttcaggggatgacgccttgcagatgccctttgttgagggagaac 664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447  tgtcagaatgattcttttcaggggatgacgccttgcagatgccctttgttgagggagaac 388

                                              
Query: 665  ggattagcctgcaaggcttttctgatcttcagga 698
            ||||||||||||||||||||||||||||||||||
Sbjct: 387  ggattagcctgcaaggcttttctgatcttcagga 354


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1098
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1088
Effective search space:   748544
Effective search space used:   748544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)