NAACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTGGGTCATAAGGTAAGTATATTTACCTTTGTAAGACACAGC
TAGACTTTCCTAAAGTGGCTGCGGTTCTCACACCCACCCACAGTGTGTGC
TTGCTCCCTGTGGATTGTTTGCTTCAATCTTTAACATGCAGGTATTTAAG
GAGTGCTGCCCACTAATGGTTCCAAGTGTAGTTTCTGTGACTCTGTGTTC
CTCTCTCTAGACTGTTCATTTTACAACAGCTTAAAACATAAATCTATGTC
AATGAGAGGGGAAAAAGTCGTAATACTACAAAGTTGGAAATAATTAAAAT
ATCTATTTTTTAGAATTAAGTAGACTTCCATTACTGAAATGAGGATAACA
TTTAAATTACTTGCATTGAAGTTGCATTCTTAGTACCAGAAGAAATGTTA
AGTTATGCAGTCAATCATTTTCCTCTACAAGGAAGGAAGATGTTTGTCTT
TTGGCCTAGTGAATTGGAGAGAATCATTGGCAGCTATGTCCTACAATAAG
ATAGAAAATTCAGTGAATATTTTTTTCCCAATCAGTACGCTGCTTATTTG
TATTATCTACTATGTCCTTAGCCTTACAGAAGCTTTCCAGTTTTATGAGA
TCCCATTTATCAATTCTTGATCTTAGAGCACGAGCCATTGGAGTCCTGTT
TAGGAAATTTCCACCTGTGCCAATGAGTTCAAGGCTCTTTCTTGCACTTC
CTCCTCCATTAGATTCAA

CACAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAGTCTCAACAAGCTGAAGTG
TCTAAGTGAGGATGCTTCAGTCCCACTTGGGAGAGAGAAGAAAGCACTCA
TANTATGGGGAGGGAGGGAGGGATTTGGGAGGGAAAGTGGATGGGGNGGG
AGGGNTCGCGGCTGGGAGGGGGGGGGGGNGTGGGGGTGGGGCGCGGGGGG
GCAGCCTCCTTTTTTGGCGCGTGCTCCCCTGCTGGTGTTGTTTGTGCGCT
TCGGCTTTCTGGTATTTGCGCCTAGCCCTGTTTTTTTGTTTGCACTCCCT
GTGGAATTTCGTTTTGTGCACTTTTCGTTTTGCCTTGTATTTCGTTTCGC
GCACCCTATCTTTTCCATACTTATTATTTTCTTTCCTCCCCCCCCCTCAT
TTTCTATTTATTTGTGTTGGTTTTCGTTCTCTCTCTCCCTTTTCCCTTCT
CCTTACGTTCCCGTTTGCCCTCCCTTCTTTTGTACTCTTCTCTTACCACT
TGTGTCATTCTCTTCTTGTTTTCTCCTCTCTATTGTTCCGCCCCTGTACT
TTCTTCACCTCCGGTCCTGTATATCCTATTTTATTCCCCTTCGCCAAACC
CACTCCTGTCCTTCTATCATCTTTTTCTATTTGCTACCGTGTCTTTTCCA
TTGTGTTGCGCCTCCCTCTTATTTTTTTCCGCCCCCTCTCTTCCTCTTTT
TTTCTGCTCGACCCTCTTGCCCTTATCCTATCATTTTCGATCCTCTTTTG
ACCCCACGCACCTTCTTTTCTATCCATCTTTTATTCTCCCTCGTCTGCAC
CCTGATGCCTATTCACTCCTTAC

Query= MSMg01no453_d18.b1 MSMg01no453_d18.b1 CHROMAT_FILE:
MSMg01no453_d18.b1 PHD_FILE: MSMg01no453_d18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:02 2005
         (625 letters)



>mm_chr13_116561973_116562997
          Length = 1025

 Score = 1139 bits (589), Expect = 0.0
 Identities = 613/621 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgggtcataaggtaagtatatttacctttgtaagacacagctagactttcctaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgggtcataaggtaagtatatttacctttgtaagacacagctagactttcctaa 264

                                                                       
Query: 65  agtggctgcggttctcacacccacccacagtgtgtgcttgctccctgtggattgtttgct 124
           ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 265 agtggctgcggttctcacatccacccacagtgtatgcttgctccctgtggattgtttgct 324

                                                                       
Query: 125 tcaatctttaacatgcaggtatttaaggagtgctgcccactaatggttccaagtgtagtt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcaatctttaacatgcaggtatttaaggagtgctgcccactaatggttccaagtgtagtt 384

                                                                       
Query: 185 tctgtgactctgtgttcctctctctagactgttcattttacaacagcttaaaacataaat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctgtgactctgtgttcctctctctagactgttcattttacaacagcttaaaacataaat 444

                                                                       
Query: 245 ctatgtcaatgagaggggaaaaagtcgtaatactacaaagttggaaataattaaaatatc 304
           |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 445 ctatgtcaatgagagggggaaaagtcataatactacaaagttggaaataattaaaatatc 504

                                                                       
Query: 305 tattttttagaattaagtagacttccattactgaaatgaggataacatttaaattacttg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 505 tattttttagaattaagtagacttccattactgaaatgaggataacatttaaattacctg 564

                                                                       
Query: 365 cattgaagttgcattcttagtaccagaagaaatgttaagttatgcagtcaatcattttcc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cattgaagttgcattcttagtaccagaagaaatgttaagttatgcagtcaatcattttcc 624

                                                                       
Query: 425 tctacaaggaaggaagatgtttgtcttttggcctagtgaattggagagaatcattggcag 484
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tccacaaggaaggaagatgtttgtcttttggcctagtgaattggagagaatcattggcag 684

                                                                       
Query: 485 ctatgtcctacaataagatagaaaattcagtgaatatttttttcccaatcagtacgctgc 544
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 685 ctatgtcctacaataagatagaaaattcagtgaatatttttttcccaatcagtaggctgc 744

                                                                       
Query: 545 ttatttgtattatctactatgtccttagccttacagaagctttccagttttatgagatcc 604
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttatttgtattatcgactatgtccttagccttacagaagctttccagttttatgagatcc 804

                                
Query: 605 catttatcaattcttgatctt 625
           |||||||||||||||||||||
Sbjct: 805 catttatcaattcttgatctt 825


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space:   624225
Effective search space used:   624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)