Query= MSMg01no453_e20.b1 MSMg01no453_e20.b1 CHROMAT_FILE:
MSMg01no453_e20.b1 PHD_FILE: MSMg01no453_e20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:08 2005
(680 letters)
>mm_chr13_73297615_73298695
Length = 1081
Score = 1286 bits (665), Expect = 0.0
Identities = 674/677 (99%), Gaps = 1/677 (0%)
Strand = Plus / Minus
Query: 5 gaattcc-cattgttctttgtgttcatttctaaggtaatcgactaagcatgtcttatagc 63
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 gaattccacattgttctttgtgttcatttctaaggtaatcgactaagcatgtcttatagc 822
Query: 64 ttatagtattttaaaagatgcattcattaaaaagaacccaaatgcacgtgggtagacaag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 ttatagtattttaaaagatgcattcattaaaaagaacccaaatgcacgtgggtagacaag 762
Query: 124 aggaccccaattttctaccatagttattttcacttcgctggaagccaagtcctcttgaac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 aggaccccaattttctaccatagttattttcacttcgctggaagccaagtcctcttgaac 702
Query: 184 ttgaaaaaccaccagcaaattaatctacaaggctttcatgacattaatctaaactcatga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ttgaaaaaccaccagcaaattaatctacaaggctttcatgacattaatctaaactcatga 642
Query: 244 aactagattaaatactggattaagaatcaaattcagaaatgctgcaatcttaaaagaaat 303
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aactagattaagtactggattaagaatcaaattcagaaatgctgcaatcttaaaagaaat 582
Query: 304 acgtcttcaggctgtcacgaaggcagactgaacccccatggcaagtgcacccaggagggg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 acgtcttcaggctgtcacgaaggcagactgaacccccatggcaagtgcacccaggagggg 522
Query: 364 actctaggggctggagggagcagccacttccaggtacgtgcagtgtgagccggaagccaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 actctaggggctggagggagcagccacttccaggtacgtgcagtgtgagccggaagccaa 462
Query: 424 caggtggcacaaatgcatttgacttgcacatgggccatcgcccgggatgacgctgcgccc 483
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 461 caggtggcacaaatgcatttgacttgcacatgggccatcgcccgggatgccgctgcgccc 402
Query: 484 cctgctttctatagcccaggcaagcagacgcaggctggcgccttggctccctttgcgagc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 cctgctttctatagcccaggcaagcagacgcaggctggcgccttggctccctttgcgagc 342
Query: 544 ctggtctgccaggtccacacggcccagcagagtccagctgggtcctgagctgcgcgccgc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ctggtctgccaggtccacacggcccagcagagtccagctgggtcctgagctgcgcgccgc 282
Query: 604 tgaggacccagagagctccaggcagcgcgccctctgctggccgtccgcggactcgccgtt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tgaggacccagagagctccaggcagcgcgccctctgctggccgtccgcggactcgccgtt 222
Query: 664 gttcccagcctgttcgg 680
|||||||||||||||||
Sbjct: 221 gttcccagcctgttcgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1081
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1071
Effective search space: 717570
Effective search space used: 717570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_e20.g1 MSMg01no453_e20.g1 CHROMAT_FILE:
MSMg01no453_e20.g1 PHD_FILE: MSMg01no453_e20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:08 2005
(691 letters)
>mm_chr13_73105159_73106249
Length = 1091
Score = 1205 bits (623), Expect = 0.0
Identities = 663/691 (95%), Gaps = 23/691 (3%)
Strand = Plus / Plus
Query: 1 atggaatcctttctggtactgcagaaccccatttgcaagatcttaagttcatggaagtct 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 atggaatcctttctggtactgcagaaccccatttgcaagatcttaagctcatggaagtct 260
Query: 61 gagtggtgctggagaacctccttacaaagtctggagcccatggatccctgccttgtgcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtggtgctggagaacctccttacaaagtctggagcccatggatccctgccttgtgcct 320
Query: 121 gagaacccccttgtaagatctggagcccatcggaagctgcctatgtgctacataacatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagaacccccttgtaagatctggagcccatcggaagctgcctatgtgctacataacatat 380
Query: 181 tttaggggtccgaaacacatggaatccttgcctggtactgtagaacctctttgccaggtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaggggtccgaaacacatggaatccttgcctggtactgtagaacctctttgccaggtc 440
Query: 241 tgaagaccatgggaacctgcctaggtggtggataacctcattacagggtctggagcccat 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaaggccatgggaacctgcctaggtggtggataacctcattacagggtctggagcccat 500
Query: 301 agtgggggagggctcattgggtgttgaagagcctctttacagtgtctggagcccatggca 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtgagggagggctcattgggtgttgaagagcctctttacagtgtctggagcccatggca 560
Query: 361 gcctgtattgtgctacagagactgcaaggtctgtgaactgtggggaccctgcctatttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcctgtattgtgctacagagactgcaaggtctgtgaactgtggggaccctgcctatttct 620
Query: 421 caagatctggagcctgtgggagcaagcatgggtgctggagagcctttggtgctgctgaga 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caagatctggagcctgtgggagcaagcatgggtgctggagagcctttggtgct------- 673
Query: 481 ggttgacgaatgagctcatatttgaaatctgtgttcaaaactccagatatttcctgtgtg 540
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ----------------catatttgaaatctgtgttcaaaactccagatatttcctgtgtg 717
Query: 541 gcttagcattccacatgcccttcttccctcaagcaatacttcatcctttaccaagccaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gcttagcattccacatgcccttcttccctcaagcaatacttcatcctttaccaagccaga 777
Query: 601 aagccagcactgaaatgtctacttaaaggggcttctgaagtatacgtagatgagtagggt 660
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 778 aagccagcactgaaatgtctacttaaaggggattctgaagtatacatagatgagtagggt 837
Query: 661 tagaggcagctattcagttacatggagactg 691
|||||||||||||||||||||||||||||||
Sbjct: 838 tagaggcagctattcagttacatggagactg 868
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
