Query= MSMg01no453_h13.b1 MSMg01no453_h13.b1 CHROMAT_FILE:
MSMg01no453_h13.b1 PHD_FILE: MSMg01no453_h13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:21 2005
(644 letters)
>mm_chr13_38717090_38718133
Length = 1044
Score = 1214 bits (628), Expect = 0.0
Identities = 640/644 (99%)
Strand = Plus / Minus
Query: 1 gggtaaagcctgggatggtgtgcagcctctctcagggcatgttcccacccagagcttgtg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 844 gggtaaagcctgggatggtgtgcagcctctctcagggcacgttcccacccagagcttgtg 785
Query: 61 aaaggcagtgtggcagtttcctggggaaaggcattgccctttaagtcattgtggtactag 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 784 aaaggcagtgtggcagtttcctggggagaggcattgccctttaagtcattgtggtactag 725
Query: 121 ctgtagatgagacaccatggtctctctgagaccctgtgttactgtattagaatgtgcctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ctgtagatgagacaccatggtctctctgagaccctgtgttactgtattagaatgtgcctg 665
Query: 181 gcatacccccttcagtgccttactgaatacttaccaaacacccaggcatctcagtgggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gcatacccccttcagtgccttactgaatacttaccaaacacccaggcatctcagtgggaa 605
Query: 241 tgtgtgtagttactagtaacagatacatggaaaacaggcctaaaaagggcttatgtttct 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 604 tgtgtgtagttactagtaacagatacatggaaaacaggcctaaaaagagcttatgtttct 545
Query: 301 tgcatagtcctggggcagatctggaaagtccagggctggcatggtgactctatgatgtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tgcatagtcctggggcagatctggaaagtccagggctggcatggtgactctatgatgtca 485
Query: 361 gctgcttccagcctgtctccttggcacatagcccttacacttaaaagtggctatggagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gctgcttccagcctgtctccttggcacatagcccttacacttaaaagtggctatggagcc 425
Query: 421 tcagtcattatgtctccactttgtgtggtaaaagagagggctggcaggaagcagcagcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tcagtcattatgtctccactttgtgtggtaaaagagagggctggcaggaagcagcagcca 365
Query: 481 gcctctgttagaggcatgtgactaccccagtcacagttcaagtgttggtaatatggaata 540
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 364 gcctctgttagaggcatgtgactaccccagtcacagttcgagtgttggtaatatggaata 305
Query: 541 aaaatgatgcacaagtgtctgtctgttagtctgtcataccacacatggaaaagtaagtga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aaaatgatgcacaagtgtctgtctgttagtctgtcataccacacatggaaaagtaagtga 245
Query: 601 cagaaaaccctcacagccagaaagcttcaattgcaaattcagaa 644
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cagaaaaccctcacagccagaaagcttcaattgcaaattcagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_h13.g1 MSMg01no453_h13.g1 CHROMAT_FILE:
MSMg01no453_h13.g1 PHD_FILE: MSMg01no453_h13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:21 2005
(661 letters)
>mm_chr13_38531009_38532068
Length = 1060
Score = 1127 bits (583), Expect = 0.0
Identities = 641/665 (96%), Gaps = 9/665 (1%)
Strand = Plus / Plus
Query: 1 tctctctgttgttctcttttcttccctgtatctcactctttatcaggccggtgcagggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctctctgttgttctcttttcttccctgtatctcactctttatcaggccggtgcagggag 260
Query: 61 atgtggcccaagaagcagaaggcccatatactagatccacctcagtccccaaactgggta 120
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 atgtggcccaagaagcaggaggcccatatactagatccacctcagttcccaaactgggta 320
Query: 121 ----accatctgccctcctggcattgttgtttccttattggtgactcacaggtgtccttg 176
||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 tgccaccat-----ctcctggcattgttgtttccttgttggtgactcacaggtgtccttg 375
Query: 177 ttagcctgctataaaatgggcttaactgcatgtctctcaaaaccatattgtgtgatacca 236
|||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 376 ttagcctgttatataatgggcttaactgcacgtctctcaaaaccatattgtgtgatacca 435
Query: 237 agctcctgagtcagctactcaggtcccttctctctcaacgactaccacaagaactcatgg 296
|||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 436 agctccggagtcagctactcaggtcccttctctctcaacgaccaccacaagaactcatag 495
Query: 297 gacttcatcaagaaattagtcctggtttcttgcatttaattgtaagcattgttgtgcctc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gacttcatcaagaaattagtcctggtttcttgcatttaattgtaagcattgttgtgcctc 555
Query: 357 cttcctggaagatatgggctgccaaactcctccaagggcttcggtactaacacagtggcg 416
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 556 cttcctggaaggtatgggctgccaaactcctccaagggcttcggtactaacacagtgacg 615
Query: 417 ggctggtggacaccgaaatcttgttggacatgtggagaacagcagggtgatcaacagcaa 476
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 616 ggctggtggacaccgaaatcttgttggacgtgtggagaacagcagggtgatcaacagcaa 675
Query: 477 gaactttagaataagctctgagggctcaaatcagatatacaggccctgctgcggacaggc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gaactttagaataagctctgagggctcaaatcagatatacaggccctgctgcggacaggc 735
Query: 537 ttcaggaactgggggaagtttgacaccaatgaggatgaagtggagcagtgagaaaggagt 596
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 736 ttcaggaactgggggaagtttgacaccaatgaggatgaagtggagcggcgagaaaggagt 795
Query: 597 ccaaatgtgtggggctgatcactcggctgggcacatagcaagattaatgtctagtacata 656
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 796 ccaaatgtgtggggctgatcactcagctgggcacatagcaagattaatgtctagtacata 855
Query: 657 ctgtt 661
|||||
Sbjct: 856 ctgtt 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1060
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1050
Effective search space: 683550
Effective search space used: 683550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
