CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAGCTGTTTTTATTTGGAGCTTGGTATCTATCGGTTGCTTTTGACCAA
ACAATCAATGTTTAAACACCTTGAGATTTGCAGCTTTCCAAGCTGAAGAT
CTTGTTTAATGTATTCAAGGAGAAATTTTGATTATTGGTTTGAGATTTGC
CTAAAACATGAGATGCTCCTTCTATTCTGTATAACAGGAGAATGAGATCT
GGCTGCTAATAGTGGTGGCATCATTAGGCAGAGAGCAGAATGCTTCCCTC
ACAGTGCCATGTAAGCAAGAAAGGACTTAGGAATACTGACTGCCAATTCT
TCCTTACAAAATTGGAACCCTCTCCTGTAAATACCCAAGGGAAATGCTAA
CTTTTTGAGTCCAATCAGTCTCCACCAAGTCCATATTTTAAGCGCCCTGC
TAATCTGTTGCCCAGGAGCCCACCCACCTCCTGCATGCTAGCCTGTCTGA
CCCTGTAGGGCTTGCATGGCCCGGGGGGCAGATCACCTGTGGTTTTTAAG
AAAATGGAGTCTTGGCTCTCTTCACTCAACACGTTCCTGAAAATGTCAGT
GATAGCCATGGAGCAGGCACACCTATGATGGTATGCGTTTTCGTTCAAAC
CAGATTGCCATCACTGGGAAGAATCACTAATGAGGAACACAATAGATGGA
GAGGCAGTAGCAGAACCAGCCAACAGAGAGACCTAGATTTATTAATGCCT
GCCTGCGCAGCTTCTTCAACAGTGC

ATTACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTCGTTTTCTTTTTTCAAAAAAACA
AAAACAAACAAACAAAAACAAAAAACCAAAAAACAGATAGGCCGGGTCCT
AAAACCAAAAAACAGATACACCGGGTCCTCAAATCCATTCCACTAATAGT
TTTGTCTGCTTTTAAGCCAATACCATGCTGCTTTTATCTCTAGAATTAAA
CTCAAGGTCTCTAGTTCTCTTATTATTCAGGATTGTTTTGACTATTCTGA
ACATTTTTGTTTCCAAGTAAAATTTAAGATTTTTTTTCTGTGATGAATTG
AGTCAGGATTTTTATGCAAATTGTGATGAATCTGTAAATTGATATTTTTA
CAGTGATCATTTTCAGAATATTAATCATACTAATCTGTGATGATGGTAGG
TTTTCCCATCTTCTGGTGTGTTTTTAAATGTCTTGATGCTTTTGCTATGT
CTTTTCCCTCACTAGGTGGATTTACTTCAACTTTTTGAGGCAATCATGAA
TGGGATTGATCTCCTGATTTCTTTCTTGGTACGTATATAGTATTTGTATA
TAGCAAGTCTACTGATATTTGTGTGTTAATTTTGTATCCTGCTTCTTTAC
TAAGAGAATTTATCATTTATGTTTTTAGGAATTTTCTAGTAGAGTCTTTA
TGATCTTTTGTGTACAAGATCATATCATCTGTAAATAAGCTATTTTGACT
TCTTCCCTATTTGCATTCCCC

Query= MSMg01no453_i22.b1 MSMg01no453_i22.b1 CHROMAT_FILE:
MSMg01no453_i22.b1 PHD_FILE: MSMg01no453_i22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:28 2005
         (611 letters)



>mm_chr13_20283722_20284728
          Length = 1007

 Score = 1058 bits (547), Expect = 0.0
 Identities = 592/609 (97%), Gaps = 8/609 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagctgtttttatttggagcttggtatctatcggttgcttttgaccaaacaatca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 gaattcagctgtttttatttggagcttggtatctatcggttgcttttgaccaaacaatca 748

                                                                       
Query: 65  atgtttaaacaccttgagatttgcagctttccaagctgaagatcttgtttaatgtattca 124
           ||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||
Sbjct: 747 atgtttaaacaccttgagatttgcagcttcccgagctgaagatctggtttaatgtattca 688

                                                                       
Query: 125 aggagaaattttgattattggtttgagatttgcctaaaacatgagatgctccttctattc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 aggagaaattttgattattggtttgagatttgcctaaaacatgagatgctccttctattc 628

                                                                       
Query: 185 tgtataacaggagaatgagatctggctgctaatagtggtggcatcattaggcagagagca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tgtataacaggagaatgagatctggctgctaatagtggtggcatcattaggcagagagca 568

                                                                       
Query: 245 gaatgcttccctcacagtgccatgtaagcaagaaaggacttaggaatactgactgccaat 304
           ||||| ||||||||||| |||||||||||||||||||||||||||||    |||||||||
Sbjct: 567 gaatgtttccctcacagagccatgtaagcaagaaaggacttaggaat----actgccaat 512

                                                                       
Query: 305 tcttccttacaaaattggaaccctctcct-gtaaatacccaagggaaatgctaactt-tt 362
           ||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||
Sbjct: 511 tcttccttacaaaattggaaccctctcctggt-aatacccaagggaaatgctaacttatt 453

                                                                       
Query: 363 tgagtccaatcagtctccaccaagtccatattttaagcgccctgctaatctgttgcccag 422
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 t-agtccaatcagtctccaccaagtccatattttaagcgccctgctaatctgttgcccag 394

                                                                       
Query: 423 gagcccacccacctcctgcatgctagcctgtctgaccctgtagggcttgcatggcccggg 482
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 393 gagcccacccacctcctgcatgctagcctgtctgagcctgtagggcttgcatggcccggg 334

                                                                       
Query: 483 gggcagatcacctgtggtttttaagaaaatggagtcttggctctcttcactcaacacgtt 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gggcagatcacctgtggtttttaagaaaatggagtcttggctctcttcactcaacacgtt 274

                                                                       
Query: 543 cctgaaaatgtcagtgatagccatggagcaggcacacctatgatggtatgcgttttcgtt 602
           |||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 273 cctgaagatgtcagtgatagccatggagcaggcacacctatgatggtgtgtgttttcgtt 214

                    
Query: 603 caaaccaga 611
           |||||||||
Sbjct: 213 caaaccaga 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1007
Length adjustment: 10
Effective length of query: 601
Effective length of database: 997
Effective search space:   599197
Effective search space used:   599197
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)