Query= MSMg01no453_p08.b1 MSMg01no453_p08.b1 CHROMAT_FILE:
MSMg01no453_p08.b1 PHD_FILE: MSMg01no453_p08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:00 2005
(655 letters)
>mm_chr13_11376841_11377895
Length = 1055
Score = 812 bits (420), Expect = 0.0
Identities = 451/464 (97%), Gaps = 6/464 (1%)
Strand = Plus / Minus
Query: 194 catatacacatgcagatacatagacacacacacactcatgcacatgcacacacacacaca 253
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1055 catatacacatgcagatacatagacacacacacactcatgcacatg----cacacacaca 1000
Query: 254 cacacaaacatatacatgcatgcatacatgtacatatacagacacacacacagaaatgca 313
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 999 cacacaaacatatacatgcacgcatacatgtacatatacagacacacacacagaaatgca 940
Query: 314 ctcatgcagacatacacacatgcatatacacacacagacacatgcatgaacacatacaga 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 ctcatgcagacatacacacatgcatatacacacacagacacatgcatgaacacatacaga 880
Query: 374 g--acacacatacatgcatgcatacacacacacagagctaattcaaaattcatgaaatct 431
| ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 879 gacacacacacacatgcatgcacacacacacacagagctaactcaaaattcatgaaatct 820
Query: 432 agaaaaggaaattggtcttactgaggagcactggtatagctgagaaaggatgccccaggg 491
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 agaaaaggaagttggtcttactgaggagcactggtatagctgagaaaggatgccccaggg 760
Query: 492 gtgtgaatcctcccagcttccttccttcctttgtatttattttcacagctgacctcttcc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 gtgtgaatcctcccagcttccttccttcctttgtatttattttcacagctgacctcttcc 700
Query: 552 tgggtgtttgaagaggatttgtggggaactcgccacaaatccgttatccaaatatgaata 611
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 699 tgggtgtttgaagaggatttgtggggaactcgccacaaatccgatatccaaatatgaata 640
Query: 612 gagaatttaaagggcaatatctggacctttctgtttttaaaatg 655
||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 639 gagaattgaaagggcaatatctggacctttctgtttttaaaatg 596
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_p08.g1 MSMg01no453_p08.g1 CHROMAT_FILE:
MSMg01no453_p08.g1 PHD_FILE: MSMg01no453_p08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:00 2005
(680 letters)
>mm_chr13_11196795_11197873
Length = 1079
Score = 1292 bits (668), Expect = 0.0
Identities = 677/680 (99%), Gaps = 1/680 (0%)
Strand = Plus / Plus
Query: 1 tttgtttagcgctgtagcccattttataatggggttatttgaatttctggagtccagctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtttagcgctgtagcccattttataatggggttatttgaatttctggagtccagctt 260
Query: 61 cttgagctctttgtatatattggatattagtcttctatccgatttaggattggtaaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgagctctttgtatatattggatattagtcttctatccgatttaggattggtaaaaaa 320
Query: 121 cctttcccactctgttggtggcctttttgtcttattgacagtttcttttgtcctacagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctttcccactctgttggtggcctttttgtcttattgacagtttcttttgtcctacagaa 380
Query: 181 gctttgctgtttcggctaaaataattggctgatttgatccagagctcctcctttgagttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctttgctgtttcggctaaaataattggctgatttgatccagagctcctcctttgagttt 440
Query: 241 ccaggagcaactacaatcacctggtatctgagtaccatttgttatattttcatggtaagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaggagcaactacaatcacctggtatctgagtaccatttgttatattttcatggtaagc 500
Query: 301 actatacctgctcagccagctgcttgtcttgtttttagcacaaaaaaaatctgttatatc 360
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 501 actatacctgctcagccagctgcttgtcttgtttttagcagaaaaaaa-tctgttatatc 559
Query: 361 agtttttaaaaaaatatttccagtaaaacagttatggtaagagtacagataagagttgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agtttttaaaaaaatatttccagtaaaacagttatggtaagagtacagataagagttgaa 619
Query: 421 aactttcaataaaaagtaacttcatctaatattctcatttcaaaaggcattgaagggttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aactttcaataaaaagtaacttcatctaatattctcatttcaaaaggcattgaagggttt 679
Query: 481 gtcttatgtcacatagtcaattattgcttatttgtgttataatttttaaaatcaagacca 540
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtcttaggtcacatagtcaattattgcttatttgtgttataatttttaaaatcaagacca 739
Query: 541 ttttgaaatcaagattttttttcttgaatctttcccaaaagaataaaaatccccctctag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttttgaaatcaagattttttttcttgaatctttcccaaaagaataaaaatccccctctag 799
Query: 601 ttactccaaatcaacaggcacttaatgccatgtgtcacagcacctgtagaaatcccagga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ttactccaaatcaacaggcacttaatgccatgtgtcacagcacctgtagaaatcccagga 859
Query: 661 tttgtagcacattaacattt 680
||||||||||||||||||||
Sbjct: 860 tttgtagcacattaacattt 879
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1079
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1069
Effective search space: 716230
Effective search space used: 716230
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
