Query= MSMg01no455_a24.b1 MSMg01no455_a24.b1 CHROMAT_FILE:
MSMg01no455_a24.b1 PHD_FILE: MSMg01no455_a24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:28 2005
(579 letters)
>mm_chr13_55809106_55810089
Length = 984
Score = 1075 bits (556), Expect = 0.0
Identities = 576/586 (98%), Gaps = 7/586 (1%)
Strand = Plus / Minus
Query: 1 acccagaaaaaccctgtaaccatacttattggctactttattgggttcttgtatgtacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 acccagaaaaaccctgtaaccatacttattggctactttattgggttcttgtatgtacca 886
Query: 61 ccctcctccaccccaatcccttccaacccccaacaccagggaggcaggaaaggttagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 ccctcctccaccccaatcccttccaacccccaacaccagggaggcaggaaaggttagaag 826
Query: 121 ggaaaggtcatagatctctttagactacttctggctgattaggagtgtagagttccttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 ggaaaggtcatagatctctttagactacttctggctgattaggagtgtagagttccttgg 766
Query: 181 ggcaatgttgatcctcattgtcaggggatctccaagcagcaacttagcaaaagcaaccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 ggcaatgttgatcctcattgtcaggggatctccaagcagcaacttagcaaaagcaaccag 706
Query: 241 catctttcaatgcagcaaacagcaaagacagcagcatcctctctggcccttttataccct 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 catccagcaatgcagcaaacagcaaagacagcagcatcctctctggcccttttataccct 646
Query: 301 ctcaagagtccccagatgcaaactatctgtaaaatgtaaacaaatgtaaaatataacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ctcaagagtccccagatgcaaactatctgtaaaatgtaaacaaatgtaaaatataacaaa 586
Query: 361 acatactcacatattttttagtgagaccaaaaaatctcactgcaaaaccttgtcttg--- 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 acatactcacatattttttagtgagaccaaaaaatctcactgcaaaaccttgtcttgaaa 526
Query: 418 --aaacaagagtcatgtgtatccctgcagggctgcagggctgcagggctgcaaggctgca 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 caaaacaagagtcatgtgtatccctgcagggctgcagggctgcagggctgcaaggctgca 466
Query: 476 ggagtgcaggctgcaggcaagtactggtacacctagtctt--tgtgtgtgtgtgtgtggt 533
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 465 ggagtgcaggctgcaggcaagtactggtacacctagtctttgtgtgtgtgtgtgtgtggt 406
Query: 534 ttttccagacagggtttctctttatagccctggctgtcctggaact 579
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ttttccagacagggtttctctttatagccctggctgtcctggaact 360
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 984
Length adjustment: 10
Effective length of query: 569
Effective length of database: 974
Effective search space: 554206
Effective search space used: 554206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_a24.g1 MSMg01no455_a24.g1 CHROMAT_FILE:
MSMg01no455_a24.g1 PHD_FILE: MSMg01no455_a24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:28 2005
(232 letters)
>mm_chr13_55650364_55650995
Length = 632
Score = 433 bits (224), Expect = e-126
Identities = 230/232 (99%)
Strand = Plus / Plus
Query: 1 agctcatccacatctcggtggtccaccgcaggctccccagggatcccgcccagggtgccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agctcatccacatctcggtggtccaccgcaggctccccagggatcccgcccagggtgccc 260
Query: 61 cccttcatgggcagctcctctttccgcctggtcagcctcgagcggagcttctcccggatc 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 cccttcatgggcagctcctctttccgcctggtcagccttgagcggagcttctcccggatc 320
Query: 121 tcagtataattccggctcgtcggggcagcgagtggctgggggagggggaggtgctgacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagtataattccggctcgtcggggcagcgagtggctgggggagggggaggtgctgacat 380
Query: 181 tacaccctgggtctgggaggcccatggcactcccacccgctggcaccatgta 232
||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacaccctgggcctgggaggcccatggcactcccacccgctggcaccatgta 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
