TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTATCTTACCATTTGGTGAACTATATATGGTTTTACATACATATATA
TGTATATATATATGTATATACATATATATATCAACTATGTATATATTTTT
TCAAGTGTATGTGTGTGTGTAAAATTCTGTTTACTAAGCCACTGACATAG
AAATAACTCAGATATTATTGGGGACTGGGGAGAATGGCTCACTGATTAAA
GTATTTGCTGTGCAAGCAAGAGGACCTAAGCCCCAATCTTCAGCAACTAC
AGAGACAGCCAGGTACAGGGATATGTGCCTGCAGCTCCAGAGCTNGGAAG
GNNNNNTGNGGNGAAGAGGTTTGGGGAAAAGGGTTTCCTTGGGCGGCTTC
CCCTGGGGCCCAAGCCCCAGCTTTAAATACCCAAATTTGGGGAAAAGGGG
NTGCCTTTAAAGGTTTTCCCGGGGGAGAAAAAAAACCTTTTTGGTTCTCC
TCCCAAAAAACTTTTGGGCAATCGTGTGTGGAAAAAAAAAAACCCCCCCC
GTTGGTGGAAAAAAAAAAAAAAAAATTCTCTTTTCCTCCCCATCNCCTAT
CCGTGAANGGAATTAGTGTTTGTTTCGTGTCTTNTCCCTTAACACCTATC
CCCTACGTTTCTTCCTCACTCCCTACACCTCCCGATTTCTCTCCCACGTT
GTATTTTCTCCTTTTCTTCTCTCTTTTTTTTTACTGCTTCCTCCCCTTTT
ATACATCCCCTTACCCTTCATTATTCTGCTCTCTCCCTCCCCCCCN

AATACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACAGGCAACTGCATTCGTGTTTACTC
ACAGATGAGTAATACTCAGATTCTGTTCGCTCATAACTGTTAAAAAAACA
AAAACAGTTGTAACAAACGATCGCTTCTTCACATTTCCAAACAATGTAGG
ACCATGTTCTATCTACTCGTCTCAAACTGGGACATCATTTATTGGGTTAA
TATTAAAAAATAAATGTAATAAGATATATGTTAGTTAAAATATATTCAAA
GATGAATACAATAGACTATACAAGAAAAGGAAAACAAACCCAGGCCAGTA
CTCAGTAAGTCTGAAAACATGCTTTTCTTTTATACTTTTTCGTTGGAGTT
ATTCTTTTTTAACTGTCCTTGTTGAACTATGAATGAACGACACTGTTGGT
TTTTGATCTGCCACATTTTTAGGTTTAATTTCATATAATTAGTTATGTAT
TAAGACTTTGTGATATTAGTCCTCCATATAGACAACATTTCAAAGTTACT
AATTTGTGCTACAGGGAAAAGTAATTAACAAACTTATGTTTTATTATTTG
ACAATATTTATTCTTGATTCCTTTCTTGTTTCAATGAATATTTATTCTAT
TCATGTCCAGCATGTGCAGTTAATGAATGAGCCTGCTCATAAATGCTAAG
GCTTGTGAATATCAAAGATATCTTATGGAGAGATAAT

Query= MSMg01no455_j01.g1 MSMg01no455_j01.g1 CHROMAT_FILE:
MSMg01no455_j01.g1 PHD_FILE: MSMg01no455_j01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:07 2005
         (595 letters)



>mm_chr13_11795689_11796682
          Length = 994

 Score = 1098 bits (568), Expect = 0.0
 Identities = 589/596 (98%), Gaps = 2/596 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acaggcaactgcattcgtgtttactcacagatgagtaatactcagattctgttcgctcat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaggcaactgcattcgtgtttactcacagatgagtaatactcagattctgttcgctcat 260

                                                                       
Query: 61  aactgttaaaaaaacaaaaacagttgtaacaaacgatcgcttcttcacatttccaaacaa 120
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactgttaaaaaa-caaaaacagttgtaacaaacgatcgcttcttcacatttccaaacaa 319

                                                                       
Query: 121 tgtaggaccatgttctatctactcgtctcaaactgggacatcatttattgggttaatatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgtaggaccatgttctatctactcgtctcaaactgggacatcatttattgggttaatatt 379

                                                                       
Query: 181 aaaaaataaatgtaataagatatatgttagttaaaatatattcaaagatgaatacaatag 240
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 380 aaaaaataaatgtaataagatatatgatagttaaaatatattcaaagatgaatacaatag 439

                                                                       
Query: 241 actatacaagaaaaggaaaacaaacccaggccagtactcagtaagtctgaaaacatgctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 actatacaagaaaaggaaaacaaacccaggccagtactcagtaagtctgaaaacatgctt 499

                                                                       
Query: 301 ttcttttatactttttcgttggagttattctttttt-aactgtccttgttgaactatgaa 359
           ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 500 ttcttttatactttttcattggagttattctttttttaactgtccttgttgaactatgaa 559

                                                                       
Query: 360 tgaacgacactgttggtttttgatctgccacatttttaggtttaatttcatataattagt 419
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 560 tgaacgacactgttggtttttgatctgccatatttttaggtttaatttcatataattagt 619

                                                                       
Query: 420 tatgtattaagactttgtgatattagtcctccatatagacaacatttcaaagttactaat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tatgtattaagactttgtgatattagtcctccatatagacaacatttcaaagttactaat 679

                                                                       
Query: 480 ttgtgctacagggaaaagtaattaacaaacttatgttttattatttgacaatatttattc 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttgtgctacagggaaaagtaattaacaaacttatgttttattatttgacaatatttattc 739

                                                                   
Query: 540 ttgattcctttcttgtttcaatgaatatttattctattcatgtccagcatgtgcag 595
           ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 740 ttgattcctttcttgtttcaatgaatatttattctatttgtgtccagcatgtgcag 795


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 994
Length adjustment: 10
Effective length of query: 585
Effective length of database: 984
Effective search space:   575640
Effective search space used:   575640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)