Query= MSMg01no456_b02.b1 MSMg01no456_b02.b1 CHROMAT_FILE:
MSMg01no456_b02.b1 PHD_FILE: MSMg01no456_b02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:45 2005
(611 letters)
>mm_chr13_63256678_63257688
Length = 1011
Score = 1145 bits (592), Expect = 0.0
Identities = 604/608 (99%)
Strand = Plus / Minus
Query: 4 ggaattcacttgtaacgccaggaaaagctgaaaagaatagaaccccaaatcttccatttc 63
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 ggaattcacttggaaggccaggaaaagctgaaaagaatagaaccccaaatcttccatttc 752
Query: 64 acactagagctgactgtggagttaacactcaaaggggagactctggggtagcccggagaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 acactagagctgactgtggagttaacactcaaaggggagactctggggtagcccggagaa 692
Query: 124 aagccctgtgcctgtaaacaaaaactctccatgtaagctgcaagcccttacagacgcatg 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gagccctgtgcctgtaaacaaaaactctccatgtaagctgcaagcccttacagacgcatg 632
Query: 184 tgaccagggaccccgagagtgaaaggtggacactatccgtcccaggggtgcaaatggcct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tgaccagggaccccgagagtgaaaggtggacactatccgtcccaggggtgcaaatggcct 572
Query: 244 aagggttggcaccagataccaactcatctaatctcagtttccatagtttcttctgtgact 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aagggttggcaccagataccaactcatctaatctcagtttccatagtttcttctgtgact 512
Query: 304 ccaaataccatgattaaaactgcagagatgatgtgggaggaagcggctgtcagaaaggac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ccaaataccatgattaaaactgcagagatgatgtgggaggaagcggctgtcagaaaggac 452
Query: 364 agacagacagacaggatcttcgctttgcttccaccttcagcctttagcatttatctagaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 agacagacagacaggatcttcgctttgcttccaccttcagcctttagcatttatctagaa 392
Query: 424 cttgtttatgtccttcctaatgaagaatttgttctttaaaaacaaatctatcaattaaag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cttgtttatgtccttcctaatgaagaatttgttctttaaaaacaaatctatcaattaaag 332
Query: 484 caagcgagttgtgagaactcccaaagtaaggattgagctccttctttcaaaacctatttg 543
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 331 caagcgagttgtgagaactcccaaactaaggattgagctccttctttcaaaacctatttg 272
Query: 544 tttgccatcatgtcagctctgcacaagccaagacagcagcatgcagatttttggtccgcc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tttgccatcatgtcagctctgcacaagccaagacagcagcatgcagatttttggtccgcc 212
Query: 604 cccacagc 611
||||||||
Sbjct: 211 cccacagc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no456_b02.g1 MSMg01no456_b02.g1 CHROMAT_FILE:
MSMg01no456_b02.g1 PHD_FILE: MSMg01no456_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:45 2005
(332 letters)
>mm_chr13_63066452_63067182
Length = 731
Score = 619 bits (320), Expect = 0.0
Identities = 329/332 (99%), Gaps = 1/332 (0%)
Strand = Plus / Plus
Query: 1 aattctgatccctcgtgcttttgttttgtttccacgtgcaactagcgcattcatttcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattctgatccctcgtgcttttgttttgtttccacgtgcaactagcgcattcatttcaga 260
Query: 61 agggtgtgttgtgctccgtgtgattttgagaaggctgctagtgatttcctagttggtaaa 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 agggtgtgttgtgctccgtgtgattt-gagaaggctgctagtgatttcctagttggtaaa 319
Query: 121 gattaggttgtcccgtattgggagctacagagaataatattgtttactgtcgacttgtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gattaggttgtcccgtattgggagctacagagaataatattgtttactgtcgacttgtct 379
Query: 181 tttagactccagggattgtgccctgcacttacatttcattgtctccttagtttgtgcagt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 380 tttagactccagggattgtgccctgcacttacatttcattgtctccttagttcatgcagt 439
Query: 241 attgcaagttatgaactattatgtttgccttacagagaaaataactgaggctcagctcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 attgcaagttatgaactattatgtttgccttacagagaaaataactgaggctcagctcca 499
Query: 301 tcaaattgactgggtgaaaaattcccagtaac 332
||||||||||||||||||||||||||||||||
Sbjct: 500 tcaaattgactgggtgaaaaattcccagtaac 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 731
Length adjustment: 9
Effective length of query: 323
Effective length of database: 722
Effective search space: 233206
Effective search space used: 233206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
