Query= MSMg01no457_g21.b1 MSMg01no457_g21.b1 CHROMAT_FILE:
MSMg01no457_g21.b1 PHD_FILE: MSMg01no457_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:38 2005
(520 letters)
>mm_chr13_77270009_77270928
Length = 920
Score = 965 bits (499), Expect = 0.0
Identities = 515/523 (98%), Gaps = 6/523 (1%)
Strand = Plus / Minus
Query: 1 ttcaaatgtt---ttccctaaaaacttaggatagaatatacatgatcacagtaatgagaa 57
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ttcaaatgttctatt---taaaaacttaggatagaatatacatgatcacagtaatgagaa 679
Query: 58 ctgtagtttcctggtgcttctggctgacaccaactgtcaaagaatttcaggcatcaagga 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ctgtagtttcctggtgcttctggctgacaccaactgtcaaagaatttcaggcatcaagga 619
Query: 118 taggccgtggtgagagatattttaagaaagtccacaccacagtgacagttgcttgctatg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 taggccgtggtgagagatattttaagaaagtccacaccacagtgacagttgcttgctatg 559
Query: 178 tataaagggcagctcttttcacaatcactgccttcttagttttgtgttttgtatgattca 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tataaagggcagctcttttcacaatcactgccttcttagttttgtgttttgtatgattca 499
Query: 238 gggtaagtacattttaaagaattattcgtaggaagtttttaaattactacaaagaacttt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gggtaagtacattttaaagaattattcgtaggaagtttttaaattactacaaagaacttt 439
Query: 298 tttataattataaatgtagtgatgtaaattagtataaagataaacatgtagttgctaaaa 357
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 438 tttataattataaatgtagtgatgtaaattactataaagataaacatgtagttgctaaaa 379
Query: 358 actaatggtctcttttctcctcttttatgtgatgttgtcatctgtgttggtgcttgaagg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 actaatggtctcttttctcctcttttatgtgatgttgtcatctgtgttggtgcttgaagg 319
Query: 418 ttcatatctctcattctcttacccccacctcagctaggaagatatggaatctttctagaa 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ttcatatctctcattctcttacccccacctcagctaggaagatatggaatctttctagaa 259
Query: 478 atgccactagtattaactgtgttatggattgtctgttctttcc 520
|||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 258 atgccactagtattaactgtgttatggattgtttgttctttcc 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_g21.g1 MSMg01no457_g21.g1 CHROMAT_FILE:
MSMg01no457_g21.g1 PHD_FILE: MSMg01no457_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:38 2005
(372 letters)
>mm_chr13_77104741_77105512
Length = 772
Score = 719 bits (372), Expect = 0.0
Identities = 372/372 (100%)
Strand = Plus / Plus
Query: 1 acagacagagattcggttcatagctcatgattctcttcctatcaccatcccaggtgagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagacagagattcggttcatagctcatgattctcttcctatcaccatcccaggtgagct 260
Query: 61 ttacaattccatagagaggtcctgagtgtgatccaagactgaactattcaaattcccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacaattccatagagaggtcctgagtgtgatccaagactgaactattcaaattcccagc 320
Query: 121 tcaatgctagcttttcttttttgttgtttatttatttatttatttccccttccagtccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaatgctagcttttcttttttgttgtttatttatttatttatttccccttccagtccac 380
Query: 181 ccttccactgttccacatcccataccacctgctccccacccccagtctccacaaggatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttccactgttccacatcccataccacctgctccccacccccagtctccacaaggatgt 440
Query: 241 ccccaccacccaccattcaccccaccagacctctaaactccctagggcctcaagtctctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccccaccacccaccattcaccccaccagacctctaaactccctagggcctcaagtctctt 500
Query: 301 gagggtaatgtgcatcctctctgattgaacccagacccagtagtcctctgcaatatatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagggtaatgtgcatcctctctgattgaacccagacccagtagtcctctgcaatatatgt 560
Query: 361 attggaggcctc 372
||||||||||||
Sbjct: 561 attggaggcctc 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
