GGCCCCNNNNCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXCGCGGAATTCAACACAATACCAATAAAAGGATCAGGTTCTAAC
AAAGCATGCAAATACCTTAATACTTGTTTCACTTCTTTCATAGAGCAAGC
AAATTTGGGTGCAGCAAGGGAGATAGGAGACACTTTCTTTCATACCTCTT
CTTAATAAAATAAAGTAGTTAGTATTCCTTATCAACGTGAAGTAATACAA
AATGGGACCAGTCTTCCTAGTCTTGCCACAGAAATTGGCAGCACATTACC
CAGTGCACTGAATGTTCAGGCATGAAATTTACAGGATATATTAAACTTGC
CTCAAAGTTGAGAATGAGCAATGTATTGCAGAGTCAGAATCTCTGAAAGG
AGACTTTCAAAGACAAAGTGTGAACTTGTAGAGGTAAAGCCAAAATGGCA
ATGCCTCTGCTAGTTGGTGGGAAATACTCTATTTTGAGGGGAAATTTTTC
TAGAGTTCTCTTTTTTTATTGTATCCTGGTCTATTTTTATTATCAGAGTA
ATATCAATTCAGATAAATGAGTCTGTTAGTATTCCCTTTCTAGAANATTT
TAAATATTTAAATTAAATGTTGAGGAAGTCAAATATTTTGAAATTTTTAA
TTATTAAGGGATTAGAAACTTACAATGGCATAAATATTTATCTTATCACC
TTATCCTGTAAAATTTACGGGGTTTCTTGAATTCCTATT

TTCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTGCACTACAACCATCTTGTCTTGGAC
TTTTTTGTTGTCGTTGCTGGGAGTCTCTTAATGTCTGCTTCTATTCTTTA
CGGGTTGTGGAATGTTTTATATGGTTTATCTGATCTTGATTTAACTTTGG
TACCTGGTATCTGTCTAGTAAATTGTCTATTTCATCCAGATTTTCCAGTT
TTGTTGAGTATGGGCTTTTGTAGTAGAATCAGATAATTATTTAAATTTTC
TTCATTTCCATTGTTATGTCTCCCTTCTCATTTCTGCTATTATTAATTTA
GATACTGTTTCGGTGCTCTCTGGTTAGTCTGGCTTTGGGTTTATCTATCT
TGTTGATTTTTCTCAAAGAACCACTCCTGGTTTTGTTGATTCTTTGTAAA
GATCTTTTTGTTTCTACTTGGTTGATTTCAGCCCTGAGTTTGATTATTTC
CTGCTGTCTATTCCTCTTGGGTGTATAATGCATTCATTAGACATAAAAAA
TTGGAAGGTCAATAATTCCAATACAACAATGTTGGAACATCATTTATTCC
CCAGTTATTATGGCAATAGATCTAGCGTCACAAATCTGGCAGGTGAGCAG
TTATTAAGCACATATATCTCACACTCTGTATCTGTACTAAAAGGTGGAAA
AAGCCTCAGCATTCTAGTCCTTTTATTGCTAGAGATGCACCAC

Query= MSMg01no458_e18.g1 MSMg01no458_e18.g1 CHROMAT_FILE:
MSMg01no458_e18.g1 PHD_FILE: MSMg01no458_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:51 2005
         (571 letters)



>mm_chr13_27818863_27819833
          Length = 971

 Score =  801 bits (414), Expect = 0.0
 Identities = 535/580 (92%), Gaps = 12/580 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgcactacaaccatcttgtcttggactttt------ttgttgtcgttgctgggagtctct 54
           |||||||||||||||||||| |||  ||||      ||||||| |||| |||||| || |
Sbjct: 195 tgcactacaaccatcttgtcctggggttttttgttgttgttgttgttgttgggagacttt 254

                                                                       
Query: 55  taatgtctgcttctatt-ctttacgggttgtggaatgttttatatggtttatctgatctt 113
           ||||||||||||||||| ||||| ||||| ||||||| ||||||||| || |||||||||
Sbjct: 255 taatgtctgcttctattcctttaggggttatggaatggtttatatggcttgtctgatctt 314

                                                                       
Query: 114 gatttaactttggtacctggtatctgtctagtaaattgtctatttcatccagattttcca 173
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 315 gatttaactttggtacctggtatctgtctagtaaattgtccatttcatccagattttcca 374

                                                                       
Query: 174 gttttgttgagtatgggcttttgtagtagaatcagataattatttaaattttcttcattt 233
           ||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||
Sbjct: 375 gttttgttgagtatgggcttttgtagtagaatcagatgattatttaaatgtccttcattt 434

                                                                       
Query: 234 ccattgttatgtctcccttctcatttctgctattattaatttagatactgtttcggtgct 293
           || ||||||||||||| || || |||||||||||| |||||| |||||||| || |||||
Sbjct: 435 ccgttgttatgtctccattttcctttctgctattactaatttggatactgtctctgtgct 494

                                                                       
Query: 294 ctctggttagtctggctttgggtttatctatcttgttgatttttctcaaagaaccactcc 353
           |||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 495 ctctggttagtctggctcagggtttatctatcttgttgatttt-ctcaaagaaccactcc 553

                                                                       
Query: 354 tggttttgttgattctttgtaaagatctttttgtttctacttggttgatttcagccctga 413
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tggttttgttgattctttgtaaagatctttttgtttctacttggttgatttcagccctga 613

                                                                       
Query: 414 gtttgattatttcctgctgtctattcctcttgggtgtataatgcattcattagacataaa 473
           | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 614 gattgattatttcctgctgtctactcctcttgggtgtataatgcattcattagacataaa 673

                                                                       
Query: 474 aaattggaaggtcaataattccaatacaacaatgttggaa--catcatttattccccagt 531
           |||||||||||||||||||||||||| |||||||||||||  |  ||||||||||||| |
Sbjct: 674 aaattggaaggtcaataattccaataaaacaatgttggaaggc--catttattccccaat 731

                                                   
Query: 532 tattatggcaatagatctagcgtcacaaatctggcaggtg 571
           |||||||| ||||||||||||||| |||||||| ||||||
Sbjct: 732 tattatggtaatagatctagcgtcgcaaatctgtcaggtg 771


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)