Query= MSMg01no458_j15.b1 MSMg01no458_j15.b1 CHROMAT_FILE:
MSMg01no458_j15.b1 PHD_FILE: MSMg01no458_j15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:15 2005
(637 letters)
>mm_chr13_76696842_76697878
Length = 1037
Score = 1147 bits (593), Expect = 0.0
Identities = 626/641 (97%), Gaps = 8/641 (1%)
Strand = Plus / Plus
Query: 1 attctgggtcttcatcgtctctcacataatttttaatattctattagggttgttacatcg 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctgggtcttcatcatctctcacataatttttaatattctattagggttgttacatcg 260
Query: 61 ctgagtataaatatcatataaatgtttggcccatttcccaactccatagatccttggtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgagtataaatatcatataaatgtttggcccatttcccaactccatagatccttggtaa 320
Query: 121 cagggggcaatgaattatttctcttatccctatgcttggcaaaacagttgcacaaatagg 180
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 cagggggcaatgaatgatttctcttattcctatgcttggcaaaacagttgcacaaatagg 380
Query: 181 gaatattattagataaattaacctttttaacaatgtatttataaaacgtgtgatgtgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaatattattagataaattaacctttttaacaatgtatttataaaacgtgtgatgtgttt 440
Query: 241 gcaacatct----atttttggtggcatatctgttcgctttcttagtaatccactcctaaa 296
||||||||| | |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 gcaacatctaggga----tggtggcatatctgttagctttcttagtaatccactcctaaa 496
Query: 297 ctttgtaattaaaaacaaccaccatttgtttagctcatgttatatgttgatattgtgaca 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ctttgtaattaaaaacaaccaccatttgtttagctcatgttatatgttgatattgtgaca 556
Query: 357 gagctgatctgtgcttgtctcatagtgttagctcagctaagtggctcccctggaattagt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gagctgatctgtgcttgtctcatagtgttagctcagctaagtggctcccctggaattagt 616
Query: 417 agatggctttgatgggtctggctaggctagaacagtcttagctgcttgtctcacattcaa 476
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tgatggctttgatgggtctggctaggctagaacagtcttagctgcttgtctcacattcaa 676
Query: 477 gtggcttctcttgctttagctgggtagcccaggcaaattcagatggaaagacctcgtgag 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 677 gtggcttctcttgctttagctgggtagcccaggcaaattcagatggaaagacctcttgag 736
Query: 537 gctgcacacagcatttagacacacactataaatcagaagaaatcacaaagccagactcct 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gctgcacacagcatttagacacacactataaatcagaagaaatcacaaagccagactcct 796
Query: 597 atcagtcagagggaagagaaactctatctttttacaggaag 637
|||||||||||||||||||||||||| ||||||||||||||
Sbjct: 797 atcagtcagagggaagagaaactctacctttttacaggaag 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_j15.g1 MSMg01no458_j15.g1 CHROMAT_FILE:
MSMg01no458_j15.g1 PHD_FILE: MSMg01no458_j15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:15 2005
(559 letters)
>mm_chr13_76878259_76879217
Length = 959
Score = 598 bits (309), Expect = e-175
Identities = 315/317 (99%)
Strand = Plus / Minus
Query: 1 tggagaaaccttgggtcaaatcattctgcacacagtaagtaccacttcagtgtccagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tggagaaaccttgggtcaaatcattctgcacacagtaagtaccacttcagtgtccagcaa 258
Query: 61 gacgagagatcacaaagcaagagaaagcagcagtaggaaattgctaaataataaatctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gacgagagatcacaaagcaagagaaagcagcagtaggaaattgctaaataataaatctac 198
Query: 121 atttaaagaaaactaaatattagtctgcaaacttcgaatacccaaggtacaattcacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 atttaaagaaaactaaatattagtctgcaaacttcgaatacccaaggtacaattcacaga 138
Query: 181 ccacatgaagttcaagaagaaggaagaccaaagtgtgggtgcttcatagcttcttagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 ccacatgaagttcaagaagaaggaagaccaaagtgtgggtgcttcatagcttcttagaag 78
Query: 241 ggtgaataatttactcatgggagaaaatatggagacaaagtgtagagcagagcctgaagg 300
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 ggtgaataaaatactcatgggagaaaatatggagacaaagtgtagagcagagcctgaagg 18
Query: 301 aaagaccatccagagac 317
|||||||||||||||||
Sbjct: 17 aaagaccatccagagac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
