Query= MSMg01no458_j23.b1 MSMg01no458_j23.b1 CHROMAT_FILE:
MSMg01no458_j23.b1 PHD_FILE: MSMg01no458_j23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:16 2005
(621 letters)
>mm_chr13_82871221_82872241
Length = 1021
Score = 1065 bits (551), Expect = 0.0
Identities = 599/615 (97%)
Strand = Plus / Plus
Query: 7 gaattcacaaatggctaccctctgtctcctagactcccaggtgctttgattctggcaata 66
||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 207 gaattcacaaatggcaatcctctgtctcctagcctcccaggtgctttgattctggcaata 266
Query: 67 tgcaataggtttccagcagcttctggccagagagcatacactgggaaacatcattatcaa 126
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tgcaataggtttccagcagctactggccagagagcatacactgggaaacatcattatcaa 326
Query: 127 ctcacatgttttctaactgatggaatctgagaatgaagaagagaagtaagataatgtgtt 186
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 327 ctcatatgttttctaactgatggaatctgagaatgaagaagagaagtaagatcatgtgtt 386
Query: 187 ctacacacccatgtcaatcatcatagtcagctacacatgcttgaagaagtggaggatgct 246
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 387 ctacacacccatgtcaatcatcatagtcagctacaaatgcttgaagaagtggaggatgct 446
Query: 247 ttaaaattgatggaaaatactcagccccctgatttatatgttaaatttggaattcctttc 306
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 447 ttaaaattgatggaaaatactcagccccttgatttatatgttaaatttggaattcctttc 506
Query: 307 tgactagcaataaacaaataatgaatttcacagagtattctgaaataaagataatgattt 366
||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||
Sbjct: 507 tgactagcaataaacaaataatgtatttgatagagtattctgaaataaagataatgattt 566
Query: 367 tctatattttaaaattatatttggtgataatgttgtgagtggatatgagttttgtgagtg 426
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 567 tgtatattttaaaattatatttggtgataatgttgtgagtggatatgagtttggtgagtg 626
Query: 427 taagctagtctagagtaagaggacgtgaagtataaatagagaccttagagtccagtgggt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 taagctagtctagagtaagaggacgtgaagtataaatagagaccttagagtccagtgggt 686
Query: 487 gcagacaggggaattggccataggaaattagatagaagccagaagaggtattggatacaa 546
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 687 gcagagaggggaattggccataggaaattagatagaagccagaagaggtattggatgcaa 746
Query: 547 atatataatcagtcctttcaaaatccaagaattgtttccaaaagtaaaaacaatggtagg 606
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 atatataatcagtcctatcaaaatccaagaattgtttccaaaagtaaaaacaatggtagg 806
Query: 607 aagatgctaatgtag 621
|||||||||||||||
Sbjct: 807 aagatgctaatgtag 821
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_j23.g1 MSMg01no458_j23.g1 CHROMAT_FILE:
MSMg01no458_j23.g1 PHD_FILE: MSMg01no458_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:16 2005
(627 letters)
>mm_chr13_82972157_82973184
Length = 1028
Score = 1152 bits (596), Expect = 0.0
Identities = 620/628 (98%), Gaps = 2/628 (0%)
Strand = Plus / Minus
Query: 1 tttgaccaggaagcccacattgcattgttgcgtctagggttgcagttctcttatgagatt 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 653 tttgaccaggaagcccacattgcattgttgcatctagggttgcagttctcttatgagatt 594
Query: 61 tttataagaaaagtgagagcaagagggagctcttcttctccccacctttg-aaaaaaaaa 119
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 593 tttataagaaaagtgagagcaagagggagctcttcttctccccacctctgaaaaaaaaaa 534
Query: 120 agttcacattttcctcagggaacaatatagctcttccgaactctggttactttgttctgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 agttcacattttcctcagggaacaatatagctcttccgaactctggttactttgttctgt 474
Query: 180 atctgtcatggatattgctcttggaagtcacattattcttatatgaagcagtacagaagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 atctgtcatggatattgctcttggaagtcacattattcttatatgaagcagtacagaagg 414
Query: 240 agctgacattatcttagaccttgaacttcaaacagagtggaatagaaagatgtcagttga 299
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 agctgacattagcttagaccttgaacttcaaacagagtggaatagaaagatgtcagttga 354
Query: 300 ggctaaagctttcagatattccccttgaattaaataaaatattgtggttcagacttttta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ggctaaagctttcagatattccccttgaattaaataaaatattgtggttcagacttttta 294
Query: 360 aaaatgaagtggtcaggaatacagtcctgagattttaaaaaatcacatagtataaacata 419
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aaaatgaagtggtcaggaagacagtcctgagattttaaaaaatcacatagtataaacata 234
Query: 420 tccagaatccagtgattctaaattcattgaatcatattaaaattttttatatattctatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tccagaatccagtgattctaaattcattgaatcatattaaaattttttatatattctatg 174
Query: 480 atttgtcctttaaattttaaggtgatgattttttttgagaaataaatggacatttaatag 539
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 173 atttgtcctttaaattttaaggtgatgattttttttgagaaa-aaatggacatttaatag 115
Query: 540 ttcaactattaaatttttaaacactgtcgcttaaaaaagacagatcaaagaaagaaacaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 114 ttcaactattaaatttttaaacactgtcgcttaaaaaagacagatcaaagaaacaaacaa 55
Query: 600 ataaacaagtaaacttgtgtacttgtaa 627
| ||||||||||||||||||||||||||
Sbjct: 54 acaaacaagtaaacttgtgtacttgtaa 27
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1028
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1018
Effective search space: 628106
Effective search space used: 628106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
