Query= MSMg01no458_m03.b1 MSMg01no458_m03.b1 CHROMAT_FILE:
MSMg01no458_m03.b1 PHD_FILE: MSMg01no458_m03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:26 2005
(334 letters)
>mm_chr13_71601763_71602499
Length = 737
Score = 629 bits (325), Expect = 0.0
Identities = 333/337 (98%), Gaps = 3/337 (0%)
Strand = Plus / Minus
Query: 1 tgtgctttcccagccccataagctgctgctgaatgtgactgtcagtatagggggacagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tgtgctttcccagccccataagctgctgctgaatgtgactgtcagtatagggggacagcc 478
Query: 61 ttagacactaccgactgtcaagatcatcaac---acaagttcaccacaggcacacaggat 117
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 477 ttagacactaccgactgtcaagatcatcaacacaacaagttcaccacaggcacacaggat 418
Query: 118 atcgcttcttcccaataccagaaagagggcactgtttcagttcaagtttaattcaaatat 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 atcgcttcttcccaataccagaaagagggcactgtttcagttcaagtttaattcaaatat 358
Query: 178 ccattggactcagatcagttcagtgtgaaaccccaaagaaaaaagccacaaggcaatttt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ccattggactcagatcagttcagtgtgaaaccccaaagaaaaaagccacaaggcaatttt 298
Query: 238 ccttcattgtgctgcttgatagcatgaaagcagatgaggagaagcaccgtcactgcctcc 297
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 297 ccttcattgtgctgcttgatagcatgaaagcagatggggagaagcaccgtcactgcctcc 238
Query: 298 gtttgacgctctagaaatgaaacgtgaagccatcgtc 334
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 gtttgacgctctagaaatgaaacgtgaagccatcgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 737
Length adjustment: 9
Effective length of query: 325
Effective length of database: 728
Effective search space: 236600
Effective search space used: 236600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_m03.g1 MSMg01no458_m03.g1 CHROMAT_FILE:
MSMg01no458_m03.g1 PHD_FILE: MSMg01no458_m03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:26 2005
(326 letters)
>mm_chr13_71476146_71476871
Length = 726
Score = 569 bits (294), Expect = e-166
Identities = 318/326 (97%)
Strand = Plus / Plus
Query: 1 gtctcactaagtttctaggctgtctttgaactcacagcacagctcaggggaccatgagct 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtctcactaagtttctaggccgcctttgaactcacagcacagctcaggggaccatgagct 260
Query: 61 tataattttcttgctttgctctactgagggtagctacatcattgtgctacccacctacct 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctaattttcttgctttgctctactgagggtagctacatcattgtgctacccacctacct 320
Query: 121 attttcctgagacaggcaccagaagctcacaaacatcagaagcaatagtttaaattggct 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 attttcctgagacaggcaccagaagctcacagacatcagaagcaatagtttaaattggct 380
Query: 181 agagtacatacctgcgctgggctgttcctgctcagaaatgcacctctgattgatccatag 240
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagtacacacctgagctgggctgttcctgctcagaaatgcacctctgattgatccatag 440
Query: 241 cctgcacatgtaaacgtgagttgtctgtgccatactctctacttctggccaatccacaac 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 cctgcacatgtaaacgtgagttgtctgtaccatactctctacttctggccaatccacaac 500
Query: 301 ttctctatcccacaagataaatctta 326
||||||||||||||||||||| ||||
Sbjct: 501 ttctctatcccacaagataaacctta 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
