Query= MSMg01no458_o22.b1 MSMg01no458_o22.b1 CHROMAT_FILE:
MSMg01no458_o22.b1 PHD_FILE: MSMg01no458_o22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:39 2005
(329 letters)
>mm_chr13_57579958_57580685
Length = 728
Score = 572 bits (296), Expect = e-168
Identities = 321/330 (97%), Gaps = 3/330 (0%)
Strand = Plus / Plus
Query: 1 ccccactgtggacgctctggaattccaggccttatttatttggaaagagaagactgcact 60
||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||
Sbjct: 201 ccccactgtggacgctctgtaattccagaccttatttatttggaaagagaagaccgcact 260
Query: 61 tgggaggctaatatcaagttcacaaaacccacattttattaaagagagagagagaacctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 tgggaggctaatatcaagttcacaaaacccacattttattaaagagagagaga--acctt 318
Query: 121 tcttt-gtgatattgaaagctaagaaggttatgtcgatgacagtagaaaggacaattaac 179
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 319 tcttttgtgatattgaaagctaagaaggttatgtcaatgacagtagaaaggacaattaac 378
Query: 180 aaacatagagagggtaggctggctcttgtgaactctcagaggagagttcagaacgtatct 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aaacatagagagggtaggctggctcttgtgaactctcagaggagagttcagaacgtatcc 438
Query: 240 ggacactctgttgtactctccagcaaagggaactattactagtttcagctttcacctctt 299
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ggacactctgttgtactcttcagcaaagggaactattactagtttcagctttcacctctt 498
Query: 300 tcgacaccctgaagactctggaactacgtg 329
||||||||||||||||||||||||||||||
Sbjct: 499 tcgacaccctgaagactctggaactacgtg 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 728
Length adjustment: 9
Effective length of query: 320
Effective length of database: 719
Effective search space: 230080
Effective search space used: 230080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_o22.g1 MSMg01no458_o22.g1 CHROMAT_FILE:
MSMg01no458_o22.g1 PHD_FILE: MSMg01no458_o22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:39 2005
(245 letters)
>mm_chr13_57774786_57775430
Length = 645
Score = 431 bits (223), Expect = e-125
Identities = 238/243 (97%)
Strand = Plus / Minus
Query: 1 agtgaaataggatgtgtttactattaattgtgttagcttttatctggcggctaaacacca 60
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 443 agtgaaataggatgtgtttactattaattgtgttagcttttacctgggggctaaacacca 384
Query: 61 gccatctttatttctgctcctagtggggacactggtcatggtcactattcctcctcaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gccatctttatttctgctcctagtggggacactggtcatggtcactattcctcctcaact 324
Query: 121 tgtgggaggccagggtgatggagagataggttatctttttattgggacctgtagaggatt 180
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 323 tgtgggaggccagggtgatggagagataggttatctttttattgggacctatagaggaat 264
Query: 181 ggtttgagttaccaagctataagtggtacttttaaatgctttacctatttcactgggcgt 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggtttgagttaccaagctacaagtggtacttttaaatgctttacctatttcactgggcgt 204
Query: 241 ggt 243
|||
Sbjct: 203 ggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
