Query= MSMg01no460_f19.b1 MSMg01no460_f19.b1 CHROMAT_FILE:
MSMg01no460_f19.b1 PHD_FILE: MSMg01no460_f19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:35 2005
(485 letters)
>mm_chr13_58714141_58715025
Length = 885
Score = 926 bits (479), Expect = 0.0
Identities = 482/483 (99%)
Strand = Plus / Plus
Query: 1 catctcacctctctccacccccacacaaagatacacacagtaattactctttcccattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catctcacctctctccacccccacacaaagatacacacagtaattactctttcccattct 260
Query: 61 ccaacctcaccataaaaacttgatacccgaggcagctgcacatataactttgaccctaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaacctcaccataaaaacttgatacccgaggcagctgcacatataactttgaccctaag 320
Query: 121 atgccccagatggtcacatccagactacaggttgatcttatatgaaacctgcagcctgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgccccagatggtcacatccagactacaggttgatcttatatgaaacctgcagcctgtg 380
Query: 181 gagataaagctctcagaaccaatgggagtccagcttgttatgaaacaccagagctgactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagataaagctctcagaaccaatgggagtccagcttgttatgaaacaccagagctgactg 440
Query: 241 gagttatgggtctatcagaaacgatggtggtcccttgctatgaactacatgtggcttatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagttatgggtctatcagaaacgatggtggtcccttgctatgaactacatgtggcttatc 500
Query: 301 gctctcaatctggaaacaagccattcaatcagaaaaaagaggtgaaaattctttcctctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctctcaatctggaaacaagccattcaatcagaaaaaagaggtgaaaattctttcctctt 560
Query: 361 tcccaggactggattttatatcatctagagtgatttcaagtcctgatttgttagaagtag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcccaggactggattttatatcatctagagtgatttcaagtcctgatttgttagaagtag 620
Query: 421 ctgtgtctcccaactcctctgggccgttttctttttggagtccccaaatctcatttttgt 480
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 ctgtgtctcccaactcctctgggccgttttcttcttggagtccccaaatctcatttttgt 680
Query: 481 ttg 483
|||
Sbjct: 681 ttg 683
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_f19.g1 MSMg01no460_f19.g1 CHROMAT_FILE:
MSMg01no460_f19.g1 PHD_FILE: MSMg01no460_f19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:35 2005
(504 letters)
>mm_chr13_58831707_58832609
Length = 903
Score = 951 bits (492), Expect = 0.0
Identities = 501/504 (99%), Gaps = 1/504 (0%)
Strand = Plus / Minus
Query: 1 aggacctctggaagagccactgctcctaactgctgagccatctctccagcccctctacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 aggacctctggaagagccactgctcctaactgctgagccatctctccagcccctctacca 697
Query: 61 tactcttttcatgtggatttccaggagctgtcgtctttccagtggacagctgtggatctc 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tactctttccatgtggatttccaggagctgtcgtctttccagtggacagctgtggatctc 637
Query: 121 tctccaagccagccacgtgacagcagtgagaaacctgcgcagagcagggcttcagcaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tctccaagccagccacgtgacagcagtgagaaacctgcgcagagcagggcttcagcaatc 577
Query: 181 tcagtggaacagccacaccccctctgagagtctagccacccccagctatggagttgaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tcagtggaacagccacaccccctctgagagtctagccacccccagctatggagttgaagc 517
Query: 241 atcatgagctaagcagctctctgatctacctggggcaacatttaaaacttcccagcaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 atcatgagctaagcagctctctgatctacctggggcaacatttaaaacttcccagcaagg 457
Query: 301 agcattttccagggtaccaaagcccagactgccttgaggaagcaggcaggttgttgccac 360
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 456 agcatttcccagggtaccaaagcccaga-tgccttgaggaagcaggcaggttgttgccac 398
Query: 361 agatctggtgccctcccccacccctctcgctgctgcatgcagtccttttatggtatggca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 agatctggtgccctcccccacccctctcgctgctgcatgcagtccttttatggtatggca 338
Query: 421 gcagggttccattgcctttgagcccagagtgagaaagtacccaggggcttctgcatcgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gcagggttccattgcctttgagcccagagtgagaaagtacccaggggcttctgcatcgca 278
Query: 481 gtggttttatacatcccatgtttc 504
||||||||||||||||||||||||
Sbjct: 277 gtggttttatacatcccatgtttc 254
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 903
Length adjustment: 10
Effective length of query: 494
Effective length of database: 893
Effective search space: 441142
Effective search space used: 441142
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
