Query= MSMg01no461_f11.b1 MSMg01no461_f11.b1 CHROMAT_FILE:
MSMg01no461_f11.b1 PHD_FILE: MSMg01no461_f11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:54 2005
(346 letters)
>mm_chr13_36701290_36702034
Length = 745
Score = 629 bits (325), Expect = 0.0
Identities = 341/347 (98%), Gaps = 3/347 (0%)
Strand = Plus / Minus
Query: 1 agttctgacacatccacgaactcactgaaagtgactgcactcacagctccagtgtattaa 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 agttctgacacatccacaaactcactgaaagtgactgcactcacagctccagtgtattaa 486
Query: 61 aggaaggaaaagcattgagaccagaaaaaagtgtgtctacacagaaaacagcacagaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aggaaggaaaagcattgagaccagaaaaaagtgtgtctacacagaaaacagcacagaaag 426
Query: 121 ggtctcagtataagcatggtgcatcccttgtttttggagcatcccaccactccagcctct 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ggtctcagtataagcacggtgcatcccttgtttttggagcatcccaccactccagcctct 366
Query: 181 atatgtgacaatgcccaacaaagctgatgtctggagtttttacatgactgattggttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atatgtgacaatgcccaacaaagctgatgtctggagtttttacatgactgattggttgaa 306
Query: 241 tggctg-ttcttctggtcttcacctccagcaccttggaaagccaccaagggtcgccccat 299
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tggctgcctct--tggtcttcacctccagcaccttggaaagccaccaagggtcgccccat 248
Query: 300 taacataaacttccagggtggtatagggggctcactatgaatgacag 346
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 taacataaacttccagggtggtatagggggctcactatgaatgacag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 745
Length adjustment: 9
Effective length of query: 337
Effective length of database: 736
Effective search space: 248032
Effective search space used: 248032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_f11.g1 MSMg01no461_f11.g1 CHROMAT_FILE:
MSMg01no461_f11.g1 PHD_FILE: MSMg01no461_f11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:54 2005
(238 letters)
>mm_chr13_36513648_36514278
Length = 631
Score = 422 bits (218), Expect = e-122
Identities = 230/238 (96%), Gaps = 7/238 (2%)
Strand = Plus / Plus
Query: 1 cagctcctacccttgtcatttttgggggtgtcaaagtggagtcagttatttcctaagcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagctcctacccttgtcatttttgggggtgtcaaagtggagtcagttatttcctaagcct 260
Query: 61 catcagcttcctgatctttaaaatggatttaacagcgaacctaccttaaaagttattttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcagcttcctgatctttaaaatggatttaacagcgaacctaccttaaaagttattttg 320
Query: 121 taaagcctgacatggtagtgcttaggaagccaagagctaaggcaagatcaaaagttgttg 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 taaagcctgacatggtagtgcttaggaagc-------taaggcaagatcaaaagttgttg 373
Query: 181 tcctgtttcaagtacatagcaagtccctgtgtcagaaaagtgggagggagcagagata 238
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tcctgtttcaaatacatagcaagtccctgtgtcagaaaagtgggagggagcagagata 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 631
Length adjustment: 9
Effective length of query: 229
Effective length of database: 622
Effective search space: 142438
Effective search space used: 142438
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
