Query= MSMg01no461_l09.b1 MSMg01no461_l09.b1 CHROMAT_FILE:
MSMg01no461_l09.b1 PHD_FILE: MSMg01no461_l09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:25 2005
(242 letters)
>mm_chr13_6744676_6745317
Length = 642
Score = 385 bits (199), Expect = e-111
Identities = 232/243 (95%), Gaps = 2/243 (0%)
Strand = Plus / Plus
Query: 1 gtggaagcattggcttttctaggacctgagaaacactgatgactatgcaggtaccacact 60
|||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 201 gtggaagcattgatttttctaggacctgagaaacactgatgacggtgtaggtaccacact 260
Query: 61 aaacataaacatccttctaaaaatgtaaaaggaggtgggaacaaaaggaagtgaggcgat 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacataaacatccttctaaaaatataaaaggaggtgggaacaaaaggaagtgaggcgat 320
Query: 121 tctggtttaccaaccggatggaggcagacatctgagaaaactggaagatggctgtata-c 179
|||| |||||||||||||||||||||||| |||||||||||||||||||||||| | | |
Sbjct: 321 tctgctttaccaaccggatggaggcagacgtctgagaaaactggaagatggctg-acaac 379
Query: 180 cccctttccacacagcttgccttacagaacagaaactgttccccaagttcctcttactca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cccctttccacacagcttgccttacagaacagaaactgttccccaagttcctcttactca 439
Query: 240 ctt 242
|||
Sbjct: 440 ctt 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_l09.g1 MSMg01no461_l09.g1 CHROMAT_FILE:
MSMg01no461_l09.g1 PHD_FILE: MSMg01no461_l09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:25 2005
(242 letters)
>mm_chr13_6929145_6929786
Length = 642
Score = 460 bits (238), Expect = e-134
Identities = 241/242 (99%)
Strand = Plus / Minus
Query: 1 tcccaacagtggtgttcataagtatggatgttttattcatcagcttctctgttcttttaa 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 442 tcccaacagtggtgttcataagtatggatgttttatgcatcagcttctctgttcttttaa 383
Query: 61 aatttattcttgttcattccaagtaatagagttaactttttaattcttttcttttgagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aatttattcttgttcattccaagtaatagagttaactttttaattcttttcttttgagag 323
Query: 121 cctgtatttgtgctttttgtctgagaagcattcaatttaacaggctttaaagctgtgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cctgtatttgtgctttttgtctgagaagcattcaatttaacaggctttaaagctgtgtgt 263
Query: 181 gtgcatttatccacacatatatgtacatatttgcatttttgtacaagacaaatggggagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gtgcatttatccacacatatatgtacatatttgcatttttgtacaagacaaatggggagg 203
Query: 241 at 242
||
Sbjct: 202 at 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
