Query= MSMg01no462_n11.b1 MSMg01no462_n11.b1 CHROMAT_FILE:
MSMg01no462_n11.b1 PHD_FILE: MSMg01no462_n11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:59 2005
(459 letters)
>mm_chr13_55778403_55779261
Length = 859
Score = 841 bits (435), Expect = 0.0
Identities = 453/459 (98%)
Strand = Plus / Minus
Query: 1 tggttacaggtgctccgctggcaagatttatgacccctgtgcctgtctgtattgacgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tggttacaggtgctccgctggcaagatttatgacccctgtgcctgtctgtattgacgttc 600
Query: 61 aatggaagagtaactaaaacaagggaggccttcaggttccactcaccagtcggatcagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aatggaagagtaactaaaacaagggaggccttcaggttccactcaccagtcggatcagtt 540
Query: 121 cctcttttatgagcctggtgatctctgcctttgctttctgcacagccagctcgttggcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 cctcttttatgagcctggtgatctctgcctttgctttctgcacagccagctcgttggcac 480
Query: 181 ctgaagattcattagaaaacaaacggttcacactgctgcaccacactggctgtttctcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ctgaagattcattagaaaacaaacggttcacactgctgcaccacactggctgtttctcca 420
Query: 241 catgtttgttgtccagaagacagcacctcaagtcatgtcagaagtgcactgccctccaag 300
|||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 419 catgaaggaggtccagaagacagcacctcaagtcatgtcggaagtgcactgccctccaag 360
Query: 301 gtagtgagccagtactgctcgtttaccttctaacttaaactccaaccaaaatacctaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gtagtgagccagtactgctcgtttaccttctaacttaaactccaaccaaaatacctaatt 300
Query: 361 agggaaccctgtgtcagcccttagctcactcggacagcatgggtactaaaattagaacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 agggaaccctgtgtcagcccttagctcactcggacagcatgggtactaaaattagaacca 240
Query: 421 tgcagaaacggcaagcacacaaaatcatgaaatgctcag 459
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgcagaaacggcaagcacacaaaatcatgaaatgctcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_n11.g1 MSMg01no462_n11.g1 CHROMAT_FILE:
MSMg01no462_n11.g1 PHD_FILE: MSMg01no462_n11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:59 2005
(523 letters)
>mm_chr13_55612870_55613791
Length = 922
Score = 971 bits (502), Expect = 0.0
Identities = 518/524 (98%), Gaps = 3/524 (0%)
Strand = Plus / Plus
Query: 1 tacaggccagcctcacactacacctaggcttggggtcaaaggccacacagcctgactaga 60
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacaggccagcctcac--tacacctaggcttggggtcaaaggccacacagcctgactaga 258
Query: 61 gccagctgactgggactcagtcctcacacagggcgggaagagttccc-gttggccttgac 119
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 259 gccagctgactgggactcagtcctcacacagggcgggaagagttccccgttggccttgac 318
Query: 120 cgtacagagagtacaagccgtttttgtgcctcagttcaaacccttgctctgcagtggact 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cgtacagagagtacaagccgtttttgtgcctcagttcaaacccttgctctgcagtggact 378
Query: 180 tactgaatgggctcctccagcccaccaagctctgtcacttggagaaacaggatgacaact 239
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 379 tactgaatgggctcctccagcccaccaagctctgtcacttggggaaacaggatgacaact 438
Query: 240 gctatttcttgaataactggaattaaagttacatcctgctggggacctggctccacaggc 299
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gctattccttgaataactggaattaaagttacatcctgctggggacctggctccacaggc 498
Query: 300 tgctctcccagctaagtaagatacttcttggagacatcagcctccaataccgaaggaaca 359
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgctctcctagctaagtaagatacttcttggagacatcagcctccaataccgaaggaaca 558
Query: 360 ggctcccccttgtcactcacagatggcttggtgggagagcatcaaataccatgtcaaagt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ggctcccccttgtcactcacagatggcttggtgggagagcatcaaataccatgtcaaagt 618
Query: 420 agggaagttgggagtgcctctctactctccacctagttgggagtcctggtagttaagtgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 agggaagttgggagtgcctctctactctccacctagttgggagtcctggtagttaagtgt 678
Query: 480 ccatttggacctggatactcctgccttattggtcctggcttgct 523
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ccatttggacctggatactcctgccttattggtcctggcttgct 722
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 922
Length adjustment: 10
Effective length of query: 513
Effective length of database: 912
Effective search space: 467856
Effective search space used: 467856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
