Query= MSMg01no463_b02.b1 MSMg01no463_b02.b1 CHROMAT_FILE:
MSMg01no463_b02.b1 PHD_FILE: MSMg01no463_b02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:19 2005
(624 letters)
>mm_chr13_27659944_27660967
Length = 1024
Score = 1152 bits (596), Expect = 0.0
Identities = 614/620 (99%)
Strand = Plus / Minus
Query: 5 gaattctcttcatgatttcatggcctctgcaacatgaagtgaaattttcgataactctct 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 gaattctcttcatgaaatcatggcctctgcaacatgaagtgaaattttcgataactctct 765
Query: 65 ttacaagcataaaatgtaggaagttgctgttgtggatatcctctcccttgtaagatttct 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 764 ttacaagcataaaatgtaggaagttgctgttgtggatatcctctcccttgtaagatatct 705
Query: 125 ggatcagacgttctcaagggttttctattccacatttcacttagaaaggattagaatcaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 ggatcagacgttctcaagggttttctattccacatttcacttagaaaggattagaatcaa 645
Query: 185 gagctggtcatactatgttgctggttacctatccagacaaacagaaaggcaaacaactac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gagctggtcatactatgttgctggttacctatccagacaaacagaaaggcaaacaactac 585
Query: 245 ctcaacacagagtcaccatcttccctgaactatgtttaccttaaagtatcaaggacaaaa 304
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ctcaacacagattcaccatcttccctgaactatgtttaccttaaagtatcaaggacaaaa 525
Query: 305 tctgtgagtctaatgttctaatacacaaaatttatgaagaatactcaccatgcttttcaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tctgtgagtctaatgttctaatacacaaaatttatgaagaatactcaccatgcttttcaa 465
Query: 365 agtagcccatgcctcaaggcaggaatatagcacaaagagatgacaaggaatcttcagata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 agtagcccatgcctcaaggcaggaatatagcacaaagagatgacaaggaatcttcagata 405
Query: 425 tgaaaagagatgggagactaataaaggaaagactcaagatatgagaagagtaggccagtt 484
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tgaaaagagatgggtgactaataaaggaaagactcaagatatgagaagagtaggccagtt 345
Query: 485 aatattattaccaattgttcatgaacaaaattttctcaccagtacagtggcattaacaac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aatattattaccaattgttcatgaacaaaattttctcaccagtacagtggcattaacaac 285
Query: 545 agcctgtgctgacctgtaaatgggggaatatgagaggtatatctaattgtaaagatttct 604
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 284 agcctgtgctgacctgtaaatgggggaatatgagagttatatctaattgtaaagatttct 225
Query: 605 tctttaaattttagcatagg 624
||||||||||||||||||||
Sbjct: 224 tctttaaattttagcatagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_b02.g1 MSMg01no463_b02.g1 CHROMAT_FILE:
MSMg01no463_b02.g1 PHD_FILE: MSMg01no463_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:19 2005
(576 letters)
>mm_chr13_27495401_27496376
Length = 976
Score = 973 bits (503), Expect = 0.0
Identities = 557/575 (96%), Gaps = 2/575 (0%)
Strand = Plus / Plus
Query: 3 ataagtcttcaaagaggagagatgaatatggtttcctttc-ttgcaatttggtccctaat 61
|||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 203 ataagtcttcaaagaggagagatggatatggtttcctttcatt-caatttggtccctaat 261
Query: 62 caaattcagggaagccttgattcgtctccatggaaataaggggaataattatgagatcct 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 caaattcagggaagccttgattcgtctccatggaaataaggggaataattatgagatcct 321
Query: 122 cagactggatttcaagcatagggagtagaagcaaccccaggtgagaaatgtcctgagtga 181
||||||| ||||||| |||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 322 cagactgcatttcaaacatatggagtagaagcaaccccaggtgagtaatgtcctgagtga 381
Query: 182 atgtgcactttgacattggcacagactatctaatattacaagaccagttgcctcctggga 241
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 382 atgtgcacgttgacattggcacagactatctaatattacaagaccacttgcctcctggga 441
Query: 242 aaatggtaaagctgttatccatatgggccaggctcaagtggaatggtgaagattccttta 301
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 442 aaatggtaaagctgttatccatatgggctaggctcaagtggaatggtgaagatttcttta 501
Query: 302 gtattaggagcatgatagtttatgaaggattgagcaatgagtgcaaaggtaagcagttgt 361
||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||
Sbjct: 502 gtattaggagcatgatagtttctgaaggattgaacaatgagtgcaaaggcaagcagttgt 561
Query: 362 gggtccctcctctaagatgctaacagtctgagactgctgacctgcaaagactaaactaac 421
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 562 gggtccctcctctaagatgctaacaatttgagactgctgacctgcaaagactaaactaac 621
Query: 422 caacccctcttcctgtgctgaacctaagaaacaggctgaggttccaggttgcagcactat 481
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 622 caacccctcttcctgtgctgaacctaagaaacaggatgagattccaggttgcagcactat 681
Query: 482 tactcagagggccttactgaatcccagcttaattacacgtgggtctgtatgtctgtcatt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tactcagagggccttactgaatcccagcttaattacacgtgggtctgtatgtctgtcatt 741
Query: 542 attcatttcattattactcctatccagaattatgg 576
|||||||||||||||||||||||||||||||||||
Sbjct: 742 attcatttcattattactcctatccagaattatgg 776
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
