Query= MSMg01no464_e21.b1 MSMg01no464_e21.b1 CHROMAT_FILE:
MSMg01no464_e21.b1 PHD_FILE: MSMg01no464_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:01 2005
(162 letters)
>mm_chr13_99437253_99437814
Length = 562
Score = 313 bits (162), Expect = 3e-90
Identities = 162/162 (100%)
Strand = Plus / Plus
Query: 1 ttagagctgtggctgggatcacatggggaggctcacctccctccatttgccgcatctggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagagctgtggctgggatcacatggggaggctcacctccctccatttgccgcatctggc 260
Query: 61 ttgagatgaacacaaaacaaaggtctgctgcctttcctgtttggcacatgtgtcttgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgagatgaacacaaaacaaaggtctgctgcctttcctgtttggcacatgtgtcttgctg 320
Query: 121 atggctgctgacctcatagagaaattcccatgcaaaacttag 162
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggctgctgacctcatagagaaattcccatgcaaaacttag 362
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 162
Length of database: 562
Length adjustment: 8
Effective length of query: 154
Effective length of database: 554
Effective search space: 85316
Effective search space used: 85316
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no464_e21.g1 MSMg01no464_e21.g1 CHROMAT_FILE:
MSMg01no464_e21.g1 PHD_FILE: MSMg01no464_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:01 2005
(504 letters)
>mm_chr13_99590311_99591213
Length = 903
Score = 920 bits (476), Expect = 0.0
Identities = 497/506 (98%), Gaps = 5/506 (0%)
Strand = Plus / Minus
Query: 1 acaggagatgcccggctactttataactttatatcattccatttttgcatgaacgacttc 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 703 acaggagatgcccggctactttataactttataacattccatttttgcatgaacgacttc 644
Query: 61 agtcccataagacctgcattgatcccttcgaagattagtgctcccatggactaaattatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 agtcccataagacctgcattgatcccttcgaagattagtgctcccatggactaaattatt 584
Query: 121 tctcctaggcccacctcctaggaaagcagttggatccaaaccatgccagccagactcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 tctcctaggcccacctcctaggaaagcagttggatccaaaccatgccagccagactcagc 524
Query: 181 tccctgaccaggctccagaggctctttaaggatgatcaagcctacttcctccttgcatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tccctgaccaggctccagaggctctttaaggatgatcaagcctacttcctccttgcatag 464
Query: 241 ctta--tttctttggtgcctcttgcttgattgctctagcttaattcctattagtccagtt 298
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 cttagc---caatggtgcctcttgcttgattgctctagcttaattcctattagtccagtt 407
Query: 299 agggagatagccagccccgagagcccagtttcttgtcagttccttcctgagggaaaagca 358
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 agggagatagccagccccaagagcccagtttcttgtcagttccttcctgagggaaaagca 347
Query: 359 gaggggggaaggctaatctcggtgagggtgccctttgagacaatgttgcatcactcatgt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gaggggggaaggctaatctcggtgagggtgccctttgagacaatgttgcatcactcatgt 287
Query: 419 aacacacatgcactgttcccacctcgcaccaggcactcactgctccatgttccttagtga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aacacacatgcactgttcccacctcgcaccaggcactcactgctccatgttccttagtga 227
Query: 479 gactcttctaccatctccttcctgtt 504
||||||||||||||||||||||||||
Sbjct: 226 gactcttctaccatctccttcctgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 903
Length adjustment: 10
Effective length of query: 494
Effective length of database: 893
Effective search space: 441142
Effective search space used: 441142
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
