MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-469J23
Chromosome	13 (Build37)
Map Location	46,240,567 - 46,241,020
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100039502, LOC667204, LOC100039533, Mylip, Gmpr, Atxn1, 5033430I15Rik
Downstream gene	ENSMUSG00000062282, Gm1574, Rbm24, Cap2, C78339, Nup153, Kif13a, LOC544928, Nhlrc1, Tpmt, Aof1, Dek, LOC100039761, Ibrdc2
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039502 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039502
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC667204 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667204
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 19 Proteins pseudo : _no_value

name	LOC100039533 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039533
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Mylip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218203 MGI:2388271
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gmpr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66355 MGI:1913605
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atxn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20238 MGI:104783
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5033430I15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76000 MGI:1923250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	ENSMUSG00000062282 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:791386 MGI:3642714
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Gm1574 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380842 MGI:2686420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbm24 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666794 MGI:3610364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67252 MGI:1914502
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C78339 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:97863 MGI:2145496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nup153 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218210 MGI:2385621
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kif13a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16553 MGI:1098264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC544928 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:544928
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 ESTs, 15 Proteins pseudo : _no_value

name	Nhlrc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105193 MGI:2145264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpmt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22017 MGI:98812
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aof1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218214 MGI:2145261
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dek (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110052 MGI:1926209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039761 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039761
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Ibrdc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218215 MGI:2384986
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039502 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264196 GeneID:100039502
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical protein LOC100039502 transcript_id : XM_001473014.1

name	LOC100039533 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264199 GeneID:100039533
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100039533 transcript_id : XM_001473236.1

name	Mylip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130050 GeneID:218203 MGI:2388271
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin regulatory light chain interacting protein transcript_id : NM_153789.3

name	Gmpr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372380 GeneID:66355 MGI:1913605
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanosine monophosphate reductase transcript_id : NM_025508.2

name	Atxn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381738 GeneID:20238 MGI:104783
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ataxin 1 transcript_id : NM_009124.3

name	5033430I15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264201 GeneID:76000 MGI:1923250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 5033430I15 gene transcript_id : XM_001473131.1

name	ENSMUSG00000062282 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264203 GeneID:791386 MGI:3642714
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, ENSMUSG00000062282 transcript_id : XM_001473359.1

name	Gm1574 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:53749205 GeneID:380842 MGI:2686420
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 1574, (NCBI) transcript_id : NM_001005422.1

name	Rbm24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487276 GeneID:666794 MGI:3610364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein 24 transcript_id : NM_001081425.1

name	Cap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892243 GeneID:67252 MGI:1914502
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CAP, adenylate cyclase-associated protein, 2 (yeast) transcript_id : NM_026056.3

name	C78339 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380819 GeneID:97863 MGI:2145496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence C78339 transcript_id : NM_001033192.2

name	Nup153 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30519890 GeneID:218210 MGI:2385621
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleoporin 153 transcript_id : NM_175749.1

name	Kif13a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120300943 GeneID:16553 MGI:1098264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinesin family member 13A transcript_id : NM_010617.2

name	Nhlrc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366928 GeneID:105193 MGI:2145264
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NHL repeat containing 1 transcript_id : NM_175340.3

name	Tpmt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7949153 GeneID:22017 MGI:98812
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thiopurine methyltransferase transcript_id : NM_016785.1

name	Aof1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26986558 GeneID:218214 MGI:2145261
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : amine oxidase, flavin containing 1 transcript_id : NM_172262.1

name	Dek (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:29789159 GeneID:110052 MGI:1926209
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEK oncogene (DNA binding) transcript_id : NM_025900.1

name	LOC100039761 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264206 GeneID:100039761
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100039761 transcript_id : XM_001473667.1

name	Ibrdc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376485 GeneID:218215 MGI:2384986
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : IBR domain containing 2 transcript_id : NM_146042.3

name	LOC100039502 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264197 GeneID:100039502
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473064.1

name	LOC100039533 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264200 GeneID:100039533
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473286.1

name	Mylip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30841031 GeneID:218203 MGI:2388271
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008092 - cytoskeletal protein binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : myosin regulatory light chain interacting protein protein_id : NP_722484.2

name	Gmpr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17975500 CCDS:CCDS26482.1 GeneID:66355 MGI:1913605
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0003920 - GMP reductase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA]; GO:0009117 - nucleotide metabolism [Evidence IEA] codon_start : 1 product : guanosine monophosphate reductase protein_id : NP_079784.1

name	Atxn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33636696 CCDS:CCDS26483.1 GeneID:20238 MGI:104783
definition	GO_component : GO:0042405 - nuclear inclusion body [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003723 - RNA binding [Evidence IDA] codon_start : 1 product : spinocerebellar ataxia 1 homolog protein_id : NP_033150.2

name	5033430I15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264202 GeneID:76000 MGI:1923250
definition	codon_start : 1 product : hypothetical protein LOC76000 protein_id : XP_001473181.1

name	ENSMUSG00000062282 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264204 GeneID:791386 MGI:3642714
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473409.1

name	Gm1574 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:53749206 GeneID:380842 MGI:2686420
definition	codon_start : 1 product : hypothetical protein LOC380842 protein_id : NP_001005422.1

name	Rbm24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487277 GeneID:666794 MGI:3610364
definition	codon_start : 1 product : RNA binding motif protein 24 protein_id : NP_001074894.1

name	Cap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385554 CCDS:CCDS26484.1 GeneID:67252 MGI:1914502
definition	codon_start : 1 note : adenylyl cyclase-associated protein 2 product : CAP, adenylate cyclase-associated protein, 2 protein_id : NP_080332.1

name	C78339 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701696 CCDS:CCDS26485.1 GeneID:97863 MGI:2145496
definition	codon_start : 1 product : Autosomal Highly Conserved Protein protein_id : NP_001028364.1

name	Nup153 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30519891 CCDS:CCDS26486.1 GeneID:218210 MGI:2385621
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0015288 - porin activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : nucleoporin 153 protein_id : NP_786925.1

name	Kif13a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120300944 GeneID:16553 MGI:1098264
definition	GO_component : GO:0005871 - kinesin complex [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA]; GO:0005875 - microtubule associated complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0007017 - microtubule-based process [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : kinesin 13A; N-3 kinesin product : kinesin family member 13A protein_id : NP_034747.2

name	Nhlrc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425030 CCDS:CCDS26487.1 GeneID:105193 MGI:2145264
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : malin protein_id : NP_780549.1

name	Tpmt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7949154 CCDS:CCDS26488.1 GeneID:22017 MGI:98812
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008119 - thiopurine S-methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : thiopurine methyltransferase protein_id : NP_058065.1

name	Aof1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26986559 CCDS:CCDS26489.1 GeneID:218214 MGI:2145261
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : amine oxidase, flavin containing 1 protein_id : NP_758466.1

name	Dek (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789160 CCDS:CCDS26490.1 GeneID:110052 MGI:1926209
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005786 - signal recognition particle (sensu Eukaryota) [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : DEK oncogene (DNA binding) protein_id : NP_080176.1

name	LOC100039761 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264207 GeneID:100039761
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473717.1

name	LOC667204 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264198 GeneID:667204
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 19 Proteins product : similar to Predicted gene, EG277333 pseudo : _no_value transcript_id : XR_031090.1

name	LOC544928 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264205 GeneID:544928
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 ESTs, 15 Proteins product : similar to coronin homolog pseudo : _no_value transcript_id : XR_031109.1

clone name	MSMg01-293P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133P12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-306L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215H01
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-469J23.T7 (MSMg01no469_j23.b1)	MSMg01-469J23.TJ (MSMg01no469_j23.g1)
ACC	AG552815	AG552816
length	806	889
length of high quality (start - end)	454 (64 - 517)	---
definition	CHROMAT_FILE: MSMg01no469_j23.b1 PHD_FILE: MSMg01no469_j23.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:46:16 2005	CHROMAT_FILE: MSMg01no469_j23.g1 PHD_FILE: MSMg01no469_j23.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:46:16 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TATATTTGCGGCGCTAAACGACTCCTATATCCANAAATCCGCGGAATTCT TCCAGTCTACCTGTGGCCTGGTGGCTGTATACCCACTCTCCTTCATTCCC CAGCTTTCTCCTCCAGAGCTTCTGTGAGACCAGCCTCTTCAGATTGCCCA CAGCAGTGAGATCATGCGGGATTCATCTTTCAGTCCTTGGCTTGTTTCCC CTGATAAATTACAGCACTCACTTATGAAAACCCCAGAAGGTTTTAAAGCA GGACCCCTGGACCCCCAACCCTAGTACAAACAAAACCATCACCAACTAGC TGTAGGACGCAGAGAAGTACTTTTAACTGCTGTGCCTGTGCATGCAGCCT CCTCTTAATCTCTTAGATGGTCAGTTTGAGGTGTTATCTTTGTCATTCTG TCTTGCTTTCAGTCATTATAACTTCAGTCCAGCTGAAACTTAACCCCAAT ACCTCATGCTTTCTCTTCTTACCCAAGAGAGTTTCCACAGGCCATGGCCA ATGAAAACTTTTTTGTTTGTTTGTTCTCTGTTTTGCGTGTGTGTTTTTTA AATGCAAATCTTAAGCCCTTCCTCAGACTCCCTGAATCAATATTCATATT TAAACATATGAATCCCTATGTGACTAACACCCAGACTTATCCCGCCCGGG GGATTCGCACCCCTGTTAACGAAGTTTGCCCCAAAATTTTCTTCCTACCC TCGTCAAGAAGGGGTTGCCCTTGCCCACATTAATACCATATATACTTTAA AGATTTGTCTCCCTTTCTCCCCCTACCCCTTCTTTACTTACAACACATAT TTTTTG	CGTCAAACACGTGCCCCTTTGCTCGTGAGTATTCCCAAAACTCGGGGTTG TTGTAGAGGGATTCCTCGATATCATTCATATATGAATATCTAGATGAAAT CCACAAGCCTCGGTAGGCGTTCGGTTGTGCTCCGTGTGACGGGTACTGGT ATGTTGGCGGTTGCGGCGGTTGTGTGTGTTGACACGGGATCACTTGATAT CGTCGGTGAGGGGCTTCCCCGTATATTAATACAAATCAAACCTTACTGCT AAATGTTCATGATCCCCCACGTAACGATGGGATCTACGGTCTTGAGACCG TGGAGATTAGGTGGTCATATTTTTTGACATCTGTCGCTTTTAGCCATTTC CGAGGTGGATACCGGAGTACCGACATCGTCGTCGTTCCCGGCTTTCGTTC GTCTTTGTCATAAGGTGCTCCCAGGAGCTTTTGAGAGCGGAGTGAGGCGC AGTATCCATTATTATGAAGAGTCTAGTACCACCGGTCGGTATAAACAACA TTAGTACAGTCTCACGAACTGCAATTGCGGACACAAGTATAAAAGGTCCC TCGAATCAAGAAATACACAATTTTTTCGGGCGGACAATATACCAGATTAG AACGCGTCAGAGAATAATCATATCCCGCCCGCGACATATATCAGTAAAAA AACTAGATTACGTAGGCCCCCCCCTTAATTACCTCCCATCCCCCCGCAAA TCGTCAAGTTTAACCAAATTATACACACGCCTTTTATTTCCCGCATTACC CCCATTCCCCTCTAATCCCCACTAGATATACATATAGCCAAATCACACCC CTCTTAATTTGTTTGCCCCCTATACCTTACAAATTTTTTTTATTTACGCT TATACCGAAGTCCCGCACTGTTTAGTGTTCCTAACATTA
quality values	Open. Hide. 6 6 6 6 11 12 27 30 24 17 18 21 23 19 16 9 9 9 23 23 25 21 10 9 9 19 17 9 9 9 12 8 3 0 3 8 10 15 15 28 28 34 34 23 21 18 21 29 29 59 31 30 23 19 15 9 9 9 9 9 13 22 12 23 21 28 33 32 39 37 43 44 57 57 57 57 50 50 53 57 57 57 57 57 57 57 57 59 59 68 68 42 42 40 41 41 42 57 47 50 50 50 50 51 68 68 68 68 68 57 57 50 48 47 47 47 50 57 57 57 57 57 57 57 57 57 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 57 57 68 68 68 68 68 68 50 50 50 50 50 50 68 68 57 57 50 50 50 51 51 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 62 62 62 62 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 57 59 57 57 59 57 57 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 54 57 57 44 41 20 23 32 33 59 44 43 35 35 43 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 68 68 59 59 59 59 68 59 59 59 59 54 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 68 68 68 68 68 68 68 59 68 68 68 57 57 57 57 48 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 48 41 41 41 41 41 59 44 41 41 44 59 59 41 32 32 41 41 44 47 47 47 42 48 59 48 48 57 48 48 48 57 57 59 59 59 59 59 59 57 48 48 48 48 43 57 48 48 48 57 48 43 43 43 37 39 37 37 30 30 37 34 39 39 37 37 41 41 36 29 29 29 29 29 37 41 41 41 41 37 41 41 44 47 59 25 25 11 11 11 23 11 11 11 18 16 15 19 28 28 24 22 12 8 8 8 8 6 6 7 8 10 24 23 28 28 34 34 16 8 8 6 6 6 9 19 14 12 9 9 11 13 14 16 24 17 17 18 16 11 11 14 14 14 16 20 12 11 11 11 11 11 9 10 8 9 10 11 17 28 24 20 20 21 24 18 16 10 11 11 16 16 22 21 19 15 14 10 10 10 15 16 13 9 9 10 10 9 8 8 8 8 9 8 12 8 9 13 13 12 17 14 15 17 15 10 8 8 10 7 7 7 6 8 8 8 8 8 8 9 13 14 19 15 11 9 9 10 10 9 8 8 8 8 8 10 12 10 10 10 8 8 12 10 8 8 9 9 13 10 10 10 13 10 12 12 18 16 14 11 9 12 8 8 9 9 9 9 10 10 9 9 15 9 8 8 8 10 10 10 10 11 11 13 20 18 13 12 12 12 9 9 8 7 7 7 6 7 10 8 8 8 10 12 8 6 6 6 6 8 8 6 6 8 10 10 10 9 12 10 12 14 13 6 6 8 8 11 15 8 8 8 8 8 10 10 10 8 10 10 11 10 13 15 10 14 9 8 8 8 8 8 8 8 8 8 8 9 10 10 10 6 10 7 6 8 6 8 6 8 6 6 10 10 17 17 11 9 9	Open. Hide. 8 8 8 8 8 8 8 8 9 9 6 8 6 6 7 8 9 12 10 8 8 8 6 6 6 6 6 6 6 6 8 8 10 10 10 10 10 8 8 8 8 6 6 8 8 8 8 9 11 11 11 11 11 8 8 8 10 8 8 8 6 6 8 8 8 8 8 8 6 6 6 6 8 8 8 6 6 8 8 8 8 6 6 6 6 10 6 6 8 8 8 8 8 6 6 6 8 8 10 10 12 11 9 10 9 9 9 9 11 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 6 6 7 8 8 10 8 8 8 8 8 8 6 6 8 10 12 10 9 9 9 8 8 6 6 6 8 8 9 9 9 9 10 10 10 10 11 11 10 10 10 10 10 10 10 10 9 9 8 12 13 8 8 8 8 8 8 6 6 6 10 10 12 12 15 11 11 11 10 10 9 8 8 8 8 8 8 8 6 8 8 8 8 8 11 12 12 11 12 12 9 8 8 8 8 8 8 9 9 9 7 6 8 6 6 6 6 6 6 8 8 6 6 8 10 10 6 6 6 6 8 8 8 11 11 10 8 8 11 11 11 11 11 9 9 9 9 9 12 13 13 8 8 8 8 8 8 11 11 10 9 6 8 6 6 6 6 8 8 8 6 6 6 8 6 7 8 8 8 8 8 8 10 8 8 6 6 8 8 8 8 8 8 8 9 10 14 15 15 17 9 9 11 11 11 10 11 10 10 10 8 8 8 8 8 8 8 8 8 6 6 8 8 6 8 8 8 8 8 8 8 8 9 9 15 16 11 11 10 10 10 10 8 8 8 10 8 7 6 6 8 8 12 9 9 11 11 8 8 8 8 8 8 11 11 11 11 11 9 9 9 9 9 8 8 8 8 8 8 10 11 10 8 8 8 8 8 8 11 15 15 12 12 11 12 8 8 8 8 8 8 8 8 8 8 10 11 11 12 10 8 8 8 8 8 8 9 10 11 11 11 10 10 10 14 10 10 9 10 10 8 8 10 10 12 9 9 9 9 9 8 8 6 6 8 8 8 8 8 8 8 8 8 6 8 6 6 8 8 8 8 6 6 8 8 8 10 10 10 10 10 10 11 11 10 8 8 8 8 8 8 8 8 8 9 9 10 11 11 12 12 8 8 8 8 8 8 8 8 8 8 10 9 10 10 10 13 9 9 8 8 8 8 8 10 12 8 8 6 6 8 8 9 9 9 13 10 6 6 6 6 8 8 10 10 10 10 10 10 11 9 8 10 8 8 8 9 10 10 11 12 12 11 13 18 18 9 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 9 9 9 8 8 10 8 8 8 10 10 10 10 9 9 9 9 9 9 9 8 8 8 8 8 8 8 8 6 6 8 8 10 10 10 10 10 8 8 8 8 8 8 8 8 8 10 8 8 8 8 10 12 16 15 12 11 11 12 11 9 9 9 8 8 8 8 8 8 8 8 9 10 9 9 9 12 15 15 11 11 11 11 11 10 10 10 11 11 11 15 9 9 8 6 6 6 8 8 11 10 10 8 8 8 8 8 8 9 10 8 8 6 7 7 9 11 11 8 10 11 11 8 8 8 8 8 9 8 10 8 8 8 8 8 10 8 8 8 8 9 9 10 10 8 8 8 8 8 8 8 8 10 13 10 10 10 8 8 8 6 8 8 6 6 8 8 8 8 8 8 8 9 10 6 8 6 6 8 8 8 7 6 8 8 10 9 6 6 6 6 6 8 8 8 11 12 11 11 11 12 12 13 11 8 8 8 8 8 8 8 8 12 12 15 13 11 11 11 11 11 12 15 8 8 8 8 8 8 8 8 8 8 10 11 11 11 15 15 13 8 8 8 8 8 8 8 11 10 8 8 6 6 8 8 8 10 8 6 6 6 7 8 6 8 8 8 8 8 8 8 8 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no469_j23.b1 MSMg01no469_j23.b1 CHROMAT_FILE:
MSMg01no469_j23.b1 PHD_FILE: MSMg01no469_j23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:16 2005
         (454 letters)



>mm_chr13_46240367_46241220
          Length = 854

 Score =  847 bits (438), Expect = 0.0
 Identities = 450/454 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tggcctggtggctgtatacccactctccttcattccccagctttctcctccagagcttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggcctggtggctgtatacccactctccttcattccccagctttctcctccagagcttct 260

                                                                       
Query: 61  gtgagaccagcctcttcagattgcccacagcagtgagatcatgcgggattcatctttcag 120
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgcgaccagcctcttcagattgcccacagcagtgagatcatgcgggattcatctttcag 320

                                                                       
Query: 121 tccttggcttgtttcccctgataaattacagcactcacttatgaaaaccccagaaggttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccttggcttgtttcccctgataaattacagcactcacttatgaaaaccccagaaggttt 380

                                                                       
Query: 181 taaagcaggacccctggacccccaaccctagtacaaacaaaaccatcaccaactagctgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaagcaggacccctggacccccaaccctagtacaaacaaaaccatcaccaactagctgt 440

                                                                       
Query: 241 aggacgcagagaagtacttttaactgctgtgcctgtgcatgcagcctcctcttaatctct 300
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggactcagagaagtacttttaactgctgtgcctgtgcatgcagcctcctcttaatctct 500

                                                                       
Query: 301 tagatggtcagtttgaggtgttatctttgtcattctgtcttgctttcagtcattataact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagatggtcagtttgaggtgttatctttgtcattctgtcttgctttcagtcattataact 560

                                                                       
Query: 361 tcagtccagctgaaacttaaccccaatacctcatgctttctcttcttacccaagagagtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 561 tcagtccagctgaaacttaaccccaatacctcatgctttctcttcttactcaagagagtt 620

                                             
Query: 421 tccacaggccatggccaatgaaaacttttttgtt 454
           |||||||||||||||||||| |||||||||||||
Sbjct: 621 tccacaggccatggccaatggaaacttttttgtt 654


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space:   374736
Effective search space used:   374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information