NCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTGTTNATGCATGTACCCCAGTTTTAAATGGGGCTATTTGA
TTTTTCTGGAGTCCAGCTTCTTGACTTCCTTGTATATATTGGATATTAGT
CCCCTATCGGATTTAGGATTGGTAAAGATCCTTTCCCAATCTGTTGGTGG
CGTTTGGGAAGAGAGGCCCTTGGTCTTGTGAAGATCATATGCCCCACTAC
AGGGGAATGCCAGGGCCAGAAAGAGGGAGTGGGTGGGTTGGGGAGCAGGG
TGGGGGGGAGGNNNNNNNNNTTTTTTTTTTNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTTNNNNNNNNNNNNTNNTNTTTTTTNTTTTTTTTTTTTTT
TTTTTTTTTTTTTTNNNTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTNNTTTTTTTTTTTTTTTTTTTNTT
TNTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTNNTTTTTNTTTTTTTTTT
TTGTTTTTTTTTCCTTTTTTTTTTTTTTNNTTTTNTTTTNTTTTTTTTTT
TTTNTTTTTTTTTTTTTTTNNTTTTTTNNTTTTTTGTTTTTTCTTTCTN

ACGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCTCATTAAGATAATGTGCATATGC
ATAAAGTGAATTCAGTATTAGGAAGTCTTGATGAACCTAAGATGACACAA
AACTGTGTTAGTCAATTTGGTTTACCAGAACAGAGTTTCAGACTGAGCGG
AATTGCTTTTGGGAACTGGAAGACTCCATTAGGGAGCACTTCAGCAGCGG
GAGCACTTCAGCAGCAGTGCTTCCTGCTGATGACACTCTTAGACCTTTCT
ATGTTGTACATGGTAGAAAACTGTAGGAAACTAAGGTCTCTCTAGTCCCC
ACTATTAAAATATTTTGCTCTTTTTGTTTGTTTGGTTTTGTTGTTCTTGC
TGTTGTTTGTTTGTTTTTTGAGACATGGTTTCTCTGTATAGCTCTGACTG
TCCTGGAACTCACTCTGACTGTCCTGGAACTCACTCTGACTGTCCTGGAA
CTCAGGGTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTG
CTTGGGTTAAAGGTGTACGCCACCACTGCCTGTCCAAATATTTACCACTT
TGAAGAGGGTGTTATGCCCAAGACCTAATCTCTTCTCTAAGGCTCCATGT
CCAGATACCATCATATTATTAGGAATGAGCTTTTACCCATCTCAGTTTCA
TGAAGCACAGAAATTTGAACAGCAATCTATATTTGCTTTCCCATATCATT
TGGCATTTATGTCAA

Query= MSMg01no471_l23.g1 MSMg01no471_l23.g1 CHROMAT_FILE:
MSMg01no471_l23.g1 PHD_FILE: MSMg01no471_l23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:07 2005
         (612 letters)



>mm_chr13_7325357_7326370
          Length = 1014

 Score =  820 bits (424), Expect = 0.0
 Identities = 553/638 (86%), Gaps = 69/638 (10%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctcattaagataatgtgcatatgcataaagtgaattcagtattaggaagtcttgatgaa 60
           |||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||
Sbjct: 690 tctcattaagataatgtgcaaatgcataaaatgaattcagtattaagaagtcttgatgaa 631

                                                                       
Query: 61  cctaagatgacacaaaactgtgttagtcaatttggtttaccagaacagagtttcagactg 120
           ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 630 cctaagacgacacaaaactgtgttagtcaatttggtttaccagaacagagtttcagcctg 571

                                                                       
Query: 121 agcggaattgcttttgggaactggaagactccattagggagca----------------- 163
           ||||||||||||| |||||||||||||||| ||||||||||||                 
Sbjct: 570 agcggaattgcttctgggaactggaagactgcattagggagcacttcagcagcgggagct 511

                                                                       
Query: 164 cttcagcagcgggagcacttcagcagcagtgcttcctgctgatgacactcttagaccttt 223
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 cttcagcagcgggagcacttcagcagcagtgcttcctgctgatgacactcttagaccttt 451

                                                                       
Query: 224 ctatgttgtacatggtagaaaac--tgtaggaaactaaggtctctctagtccccactatt 281
           || |||||||||||||||||| |  |||||||||||||||||||||| ||||||||||||
Sbjct: 450 ctttgttgtacatggtagaaagctatgtaggaaactaaggtctctctggtccccactatt 391

                                                                       
Query: 282 aaaatattttgctctttttgtttg------tttggttttgttgtt-cttgctgttgtttg 334
           ||||||||||| ||||||||||||      ||||||||||||||| | ||||||||||| 
Sbjct: 390 aaaatattttgttctttttgtttggttggttttggttttgttgttgc-tgctgttgtttt 332

                                                                       
Query: 335 tttgttttttgagacatggtttctctgtatagctctgactgtcctggaactcactctgac 394
           |||||||||||||||||||||||||| |||||                            
Sbjct: 331 tttgttttttgagacatggtttctctatatag---------------------------- 300

                                                                       
Query: 395 tgtcctggaactcactctgactgtcctggaactcagggtggcctcaaactcagaaatcca 454
                         ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 --------------ctctgactgtcctggaactcagggtggcctcaaactcagaaatcca 254

                                                                       
Query: 455 cctgcctctgcctcccaagtgcttgggttaaaggtgtacgccaccactgcctgtccaaat 514
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 253 cctgcctctgcctcccaagtgcttgggttaaaggtgtgcgccaccactgcctgtccaaat 194

                                                                       
Query: 515 atttaccactttgaagagggtgttatgcccaagacctaatctcttctctaaggctccatg 574
           ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 193 atttatcactttgaagagggtgttatgcccaagacctaatctcttctctaaggccccatg 134

                                                 
Query: 575 tccagataccatcatattattaggaatgagcttttacc 612
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tccagataccatcatattattaggaatgagcttttacc 96


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1014
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1004
Effective search space:   604408
Effective search space used:   604408
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)