NTTTGAAATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXTCGGTACGGAG
GGGCGGAATTCTTACATTGCACAAGATGGTTTCTTTCTTTTCTTTTCTTT
TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTCCTTCTTTCTTTCTT
CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCATACATACATACTTACTTAC
TTACTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCGT
TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCGTTCGTTCTTTC
TTTCTTTCTTTCTTTGAGATTTGTTTTTTTCTGGGAAGCCAAGGCTGTCC
TGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCTTG
CCTCTGCCTCCCAACTGCTGGGATTAAAGGCGTGCGCCACCACCGCTGGC
CGCAAACTGAGTTTCAAGTCAATCCAGAATCTTGGCTAAGAGCACTCAAA
ACTGATGTGAACTCTGACGTTTGAGCTGGAAAACTCTACTTCTAGATCTT
TTCTCTTTTCCAGGCTTCTTCCTTCCACCCTTCAGAGTCTCATGAGAGAC
CCCCCCAGGGCCAAACTCTTTGATATCCAGTGTCTCTATCTGCGCTGAGG
AGGGACTGATTTTGGATACATCAACAAGCAACGGGAGCATGGGCTTTGCC
TGGGCTCTTCTTGCAAGGGATGGGCTTGGCCGGTAAAAAAATN

NNNNAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCACAGATGTGAGGTCCAG
ATTATGGAAAGGAACAAGAAGACTTGTTTGAGGAAGCAGTAGGACCAAAA
GAGCTGATAAATAACCCTGGAAGCAGGAAATGGGAAAAAGTGGAACACGC
CTCTAAACGCAGTTTGTTCCACTTGCATTCCTCACCAACTGTAGAGGTCA
CCTAGCTACACAATGTGTCAGCAGGCTCACTCTGGCTTGACTGCAGAGAA
TACCTTTGACGTGTGGGTGCCAATGGACAGTTGCCTAAGCTAGTTTGCAG
GAATTCAGAGGCTGCTTTGTGTGTAGCTCTAATCAGTGTTAATTACCAAC
CTCTTCACGTGGGTCTGTACAAGGACATGGTGGGTGAGCTCTGCACGTCA
GAGCAGAAGCCACATGCAGACCTCACTACCACCACCACCTTCTGAACTTA
TACAAAAAAAAAAAAACACAAAAAAACAAAAACATGAGGTCTGCCCACAC
GCATCTGTAGATGAAAACTGAAATTCCCAAAGTGCTAAAGGAAATTATAC
ACAGCTGTATACAGTATACAGGTTCAGGAAAGGACTTTTCAGAACAGGAC
TTCAATCACCCAGAAATCTAGGCCAACAATTGATAAATGGGACCTCATAA
AACTAATAAGTCTGTATAATAAAAGAATCAAAGCN

Query= MSMg01no471_n21.g1 MSMg01no471_n21.g1 CHROMAT_FILE:
MSMg01no471_n21.g1 PHD_FILE: MSMg01no471_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:16 2005
         (638 letters)



>mm_chr13_40664618_40665655
          Length = 1038

 Score = 1110 bits (574), Expect = 0.0
 Identities = 617/638 (96%), Gaps = 12/638 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacagatgtgaggtccagattatggaaaggaacaagaagacttgtttgaggaagcagtag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacagatgtgaggtccagattatggaaaggaacaagaagacttgtttgaggaagcagtag 260

                                                                       
Query: 61  gaccaaaagagctgataaataaccctggaagcaggaaatgggaaaaagtggaacacgcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaccaaaagagctgataaataaccctggaagcaggaaatgggaaaaagtggaacacgcct 320

                                                                       
Query: 121 ctaaacgcagtttgttccacttgcattcctcaccaactgtagaggtcacctagctacaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaaacgcagtttgttccacttgcattcctcaccaactgtagaggtcacctagctacaca 380

                                                                       
Query: 181 atgtgtcagcaggctcactctggcttgactgcagagaatacctttgacgtgtgggtgcca 240
           |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtgtcatcagactcactctggcttgactgcagagaatacctttgacgtgtgggtgcca 440

                                                                       
Query: 241 atggacagttgcctaagctagtttgcaggaattcagaggctgctttgtgtgtagctctaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atggacagttgcctaagctagtttgcaggaattcagaggctgctttgtgtgtagctctaa 500

                                                                       
Query: 301 tcagtgttaattaccaacctcttcacgtgggtctgtacaaggacatggtgggtgagctct 360
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 501 tcagtgttaattaccaacctcttcacgtggggctgtacaaggacatggtgggtgagctct 560

                                                                       
Query: 361 gcacgtcagagcagaagccacatgcagacctcactaccaccaccaccttctgaacttata 420
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 gcacgtcagagcagaagccacatgcagatctcactaccaccaccaccttctgaacttata 620

                                                                       
Query: 421 caaaaaaaaaaaaacacaaaaaaacaaaaacatgaggtctgcccacacgcatctgtagat 480
           ||||||||||||||   |||||||         ||||||||||||||| |||||||||||
Sbjct: 621 caaaaaaaaaaaaa---aaaaaaa---------gaggtctgcccacacacatctgtagat 668

                                                                       
Query: 481 gaaaactgaaattcccaaagtgctaaaggaaattatacacagctgtatacagtatacagg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gaaaactgaaattcccaaagtgctaaaggaaattatacacagctgtatacagtatacagg 728

                                                                       
Query: 541 ttcaggaaaggacttttcagaacaggacttcaatcacccagaaatctaggccaacaattg 600
           |||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 729 ttcaggaaaggacttttctgaacaggaattcaatcacccagaaatttaggccaacaattg 788

                                                 
Query: 601 ataaatgggacctcataaaactaataagtctgtataat 638
           |||||| |||||||||||||||||||||||||||||||
Sbjct: 789 ataaataggacctcataaaactaataagtctgtataat 826


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space:   645584
Effective search space used:   645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)