Query= MSMg01no473_h08.b1 MSMg01no473_h08.b1 CHROMAT_FILE:
MSMg01no473_h08.b1 PHD_FILE: MSMg01no473_h08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:33 2005
(549 letters)
>mm_chr13_57226443_57227391
Length = 949
Score = 1046 bits (541), Expect = 0.0
Identities = 547/549 (99%)
Strand = Plus / Minus
Query: 1 tcaatctctagagaaaaaaaatctttatctaaaaagggaaccctgaaaacatgaagcaca 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tcaagctctagagaaaaaaaatctttatctaaaaagggaaccctgaaaacatgaagcaca 690
Query: 61 tgttaatcagacatgtccctgcactggaagctgctgggctgtgaggacacggagggacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 tgttaatcagacatgtccctgcactggaagctgctgggctgtgaggacacggagggacct 630
Query: 121 tttaatgggtccgtaaagctgtgagcttgcccactagcaccatggggagctgccgtttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tttaatgggtccgtaaagctgtgagcttgcccactagcaccatggggagctgccgtttta 570
Query: 181 tttgacttactttccccagtttttcattgcatttggggccttttaagacatgattgatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tttgacttactttccccagtttttcattgcatttggggccttttaagacatgattgatgg 510
Query: 241 gaaatccttgttgctgttgttggtaagccggtgagagtttgtatttgtcttatcacttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gaaatccttgttgctgttgttggtaagccggtgagagtttgtatttgtcttatcacttaa 450
Query: 301 cattaaaaggcaggtcaatcaggggctggagacatggtgtgcgagactgtccttattcca 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 449 cattaaaaggcaggtcaatcaggggctggagacatggtgttcgagactgtccttattcca 390
Query: 361 tactgctgcaataaaacagatacagttccagggacagactcccctgctctttgaagagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tactgctgcaataaaacagatacagttccagggacagactcccctgctctttgaagagat 330
Query: 421 ttcttccaacctgtggctataacgacagcatctgtcccagcatctcaggaaactggccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttcttccaacctgtggctataacgacagcatctgtcccagcatctcaggaaactggccaa 270
Query: 481 agtaatttctttttgtgtcgcctgttacaatgccttgaacggttagatattgaaacacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 agtaatttctttttgtgtcgcctgttacaatgccttgaacggttagatattgaaacacac 210
Query: 541 acagcctag 549
|||||||||
Sbjct: 209 acagcctag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_h08.g1 MSMg01no473_h08.g1 CHROMAT_FILE:
MSMg01no473_h08.g1 PHD_FILE: MSMg01no473_h08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:33 2005
(505 letters)
>mm_chr13_57055491_57056395
Length = 905
Score = 876 bits (453), Expect = 0.0
Identities = 489/501 (97%), Gaps = 2/501 (0%)
Strand = Plus / Plus
Query: 6 tctgcatcctgaaacctgtgctgtttgttaacagctgagctctggccccaaggctggaac 65
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 206 tctgcatcctgaaacctgtgctgtttgttaacagctgagctcttgccccaaggttggaac 265
Query: 66 aatgtggtccatgccagtgattaccaggaggacgtttggcagccctgtctcatcagaaag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aatgtggtccatgccagtgattaccaggaggacgtttggcagccctgtctcatcagaaag 325
Query: 126 ggacttccatgagttttatcctgggactctgctgactgtgtggcttatgtgctggtcatt 185
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggacttccatgagtttcatcctgggactctgctgactgtgtggcttatgtgctggtcatt 385
Query: 186 tggatattttaagaaagtaacgttggagaaaaagccaagttggagaatatgaagggttcc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tggatattttaagaaagtaacgttggagaaaaagccaagttggagaatatgaagggttcc 445
Query: 246 tgtgaatacttcacaactttccacag-attattctttacatcttactcatgaaggttaaa 304
||||||||||||||||||| |||||| || |||||||||||||||||||||||||| |||
Sbjct: 446 tgtgaatacttcacaacttcccacaggat-attctttacatcttactcatgaaggtcaaa 504
Query: 305 cttgataacttggatcactgtgtgggattggacatactctagaatggaaaatgtgtggag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttgataacttggatcactgtgtgggattggacatactctagaatggaaaatgtgtggag 564
Query: 365 tgttgtttggaccagaagacaaatgcggagaggagtaaggtcaagtttatgcaagggcag 424
|| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 565 tgctgtttggaccagaagacaaatacggagaggagtaaagtcaagtttatgcaagggcag 624
Query: 425 aagatgtgaaccagatctgctttgcaggcttacacttgctggaggagacaggctgctcac 484
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 625 aagatgtgaaccaggtctgctttgcaggcttacacttgctggaggggacaggctgctcac 684
Query: 485 agccactctgccatgggaatc 505
|||||||||||||||||||||
Sbjct: 685 agccactctgccatgggaatc 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
